Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TNFSF4P23510 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFSF4P23510 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFSF4P23510 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFSF4P23510 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFSF4P23510 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFSF4P23510 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFSF4P23510 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TNFSF4P23510 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFSF4P23510 LRRC37A12P-201ENST00000454917 1801 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFSF4P23510 AC010132.4-201ENST00000569883 1368 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 TATDN2P3-201ENST00000452855 3665 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
TNFSF4P23510 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TNFSF4P23510 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TNFSF4P23510 TMSB4XP2-201ENST00000335179 210 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 SNORA70.3-201ENST00000365075 132 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 SNORD94-201ENST00000386037 137 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TNFSF4P23510 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFSF4P23510 AL359694.1-201ENST00000403247 604 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AL353133.1-201ENST00000407695 401 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TNFSF4P23510 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFSF4P23510 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFSF4P23510 CDC42P6-201ENST00000421246 576 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFSF4P23510 MTCO2P17-201ENST00000424336 677 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFSF4P23510 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFSF4P23510 RPEP4-201ENST00000437636 602 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AC096632.2-201ENST00000438139 1239 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AC002542.1-201ENST00000440683 193 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 E2F6P3-201ENST00000441743 743 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AL592437.1-201ENST00000443781 492 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 UBBP5-201ENST00000446970 266 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AL050341.1-201ENST00000447743 313 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 TVP23CP1-201ENST00000450317 639 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFSF4P23510 RPL6P9-201ENST00000466502 859 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 RPL23AP12-201ENST00000467573 473 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFSF4P23510 RPL21P6-201ENST00000479171 504 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFSF4P23510 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFSF4P23510 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFSF4P23510 RPS27AP18-201ENST00000515536 459 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 MRPS5P3-201ENST00000515577 166 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.69□□□□□ -1.5
TNFSF4P23510 RNU6-1028P-201ENST00000517164 93 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFSF4P23510 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 AC007068.2-201ENST00000543168 395 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFSF4P23510 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFSF4P23510 SULT1C2P2-201ENST00000562517 294 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFSF4P23510 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFSF4P23510 OR4C49P-201ENST00000563891 900 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 RN7SL66P-201ENST00000582099 264 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFSF4P23510 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFSF4P23510 AC091133.5-201ENST00000603088 301 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 AC055764.2-201ENST00000610089 670 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFSF4P23510 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFSF4P23510 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFSF4P23510 AC027559.1-201ENST00000636288 271 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFSF4P23510 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
TNFSF4P23510 AC100871.1-201ENST00000507871 1456 ntBASIC5.69□□□□□ -1.5
TNFSF4P23510 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFSF4P23510 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TNFSF4P23510 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFSF4P23510 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFSF4P23510 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.68□□□□□ -1.5
TNFSF4P23510 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TNFSF4P23510 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.68□□□□□ -1.5
TNFSF4P23510 GTF2IP4-201ENST00000453092 2054 ntBASIC5.68□□□□□ -1.5
TNFSF4P23510 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms