Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 GNL2P1-201ENST00000451274 2190 ntBASIC5.83□□□□□ -1.48
CDH3P22223 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
CDH3P22223 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CDH3P22223 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.82□□□□□ -1.48
CDH3P22223 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDH3P22223 OR10R3P-201ENST00000361688 942 ntBASIC5.82□□□□□ -1.48
CDH3P22223 RN7SKP15-201ENST00000364742 309 ntBASIC5.82□□□□□ -1.48
CDH3P22223 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.82□□□□□ -1.48
CDH3P22223 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.82□□□□□ -1.48
CDH3P22223 MTATP6P19-201ENST00000413797 659 ntBASIC5.82□□□□□ -1.48
CDH3P22223 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.82□□□□□ -1.48
CDH3P22223 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH3P22223 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH3P22223 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH3P22223 UBE2V2P1-201ENST00000434717 398 ntBASIC5.82□□□□□ -1.48
CDH3P22223 AC079922.1-201ENST00000443291 359 ntBASIC5.82□□□□□ -1.48
CDH3P22223 AL512593.1-201ENST00000444758 779 ntBASIC5.82□□□□□ -1.48
CDH3P22223 RPL23AP60-201ENST00000450011 454 ntBASIC5.82□□□□□ -1.48
CDH3P22223 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH3P22223 AC093719.1-201ENST00000480427 441 ntBASIC5.82□□□□□ -1.48
CDH3P22223 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH3P22223 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.82□□□□□ -1.48
CDH3P22223 SCARNA18.1-201ENST00000516330 83 ntBASIC5.82□□□□□ -1.48
CDH3P22223 AC060775.1-201ENST00000518241 520 ntBASIC5.82□□□□□ -1.48
CDH3P22223 WBP1LP3-201ENST00000523033 208 ntBASIC5.82□□□□□ -1.48
CDH3P22223 AP004609.2-201ENST00000532177 190 ntBASIC5.82□□□□□ -1.48
CDH3P22223 OR4A40P-201ENST00000533878 948 ntBASIC5.82□□□□□ -1.48
CDH3P22223 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.82□□□□□ -1.48
CDH3P22223 AC008126.1-201ENST00000549019 480 ntBASIC5.82□□□□□ -1.48
CDH3P22223 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH3P22223 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH3P22223 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH3P22223 AC234775.3-201ENST00000564612 656 ntBASIC5.82□□□□□ -1.48
CDH3P22223 AC005244.1-201ENST00000582566 339 ntBASIC5.82□□□□□ -1.48
CDH3P22223 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH3P22223 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH3P22223 AC108865.2-201ENST00000606881 432 ntBASIC5.82□□□□□ -1.48
CDH3P22223 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH3P22223 Z95327.3-201ENST00000610385 572 ntBASIC5.82□□□□□ -1.48
CDH3P22223 OR8G7P-201ENST00000616658 848 ntBASIC5.82□□□□□ -1.48
CDH3P22223 AL136228.1-201ENST00000622221 319 ntBASIC5.82□□□□□ -1.48
CDH3P22223 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 AC022164.1-201ENST00000568767 2673 ntBASIC5.82□□□□□ -1.48
CDH3P22223 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH3P22223 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH3P22223 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH3P22223 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 RBPJP7-201ENST00000442803 1447 ntBASIC5.82□□□□□ -1.48
CDH3P22223 RBPJP5-201ENST00000449433 1447 ntBASIC5.82□□□□□ -1.48
CDH3P22223 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH3P22223 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH3P22223 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH3P22223 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH3P22223 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH3P22223 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH3P22223 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH3P22223 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH3P22223 MTCO1P8-201ENST00000416914 1523 ntBASIC5.81□□□□□ -1.48
CDH3P22223 RNA5SP477-201ENST00000362639 119 ntBASIC5.81□□□□□ -1.48
CDH3P22223 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDH3P22223 SNORA5.1-201ENST00000384275 131 ntBASIC5.81□□□□□ -1.48
CDH3P22223 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH3P22223 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH3P22223 RPS3P2-201ENST00000421346 701 ntBASIC5.81□□□□□ -1.48
CDH3P22223 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH3P22223 TUBB4BP6-201ENST00000437576 479 ntBASIC5.81□□□□□ -1.48
CDH3P22223 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH3P22223 AL022319.1-201ENST00000458183 1167 ntBASIC5.81□□□□□ -1.48
CDH3P22223 RPL12P24-201ENST00000474907 486 ntBASIC5.81□□□□□ -1.48
CDH3P22223 Y_RNA.667-201ENST00000516212 107 ntBASIC5.81□□□□□ -1.48
CDH3P22223 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH3P22223 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH3P22223 TRIM51DP-201ENST00000529746 596 ntBASIC5.81□□□□□ -1.48
CDH3P22223 TXNP4-201ENST00000575018 310 ntBASIC5.81□□□□□ -1.48
CDH3P22223 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH3P22223 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH3P22223 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH3P22223 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH3P22223 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH3P22223 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH3P22223 AC243960.7-201ENST00000623532 707 ntBASIC5.81□□□□□ -1.48
CDH3P22223 AL357562.1-201ENST00000624911 609 ntBASIC5.81□□□□□ -1.48
CDH3P22223 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH3P22223 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH3P22223 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
CDH3P22223 AC012254.3-201ENST00000591183 2117 ntBASIC5.81□□□□□ -1.48
CDH3P22223 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms