Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFRAP16234 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFRAP16234 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFRAP16234 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFRAP16234 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFRAP16234 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFRAP16234 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFRAP16234 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFRAP16234 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFRAP16234 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFRAP16234 PDZK1P1-202ENST00000425209 1350 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFRAP16234 KYNUP3-201ENST00000574386 1341 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFRAP16234 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFRAP16234 MTHFD2P5-201ENST00000320415 844 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFRAP16234 RNA5SP510-201ENST00000364697 99 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFRAP16234 AL589994.1-201ENST00000404962 340 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 MIR1203-201ENST00000408812 85 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 RN7SKP29-201ENST00000410957 272 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.1□□□□□ -1.43
PDGFRAP16234 OR5W1P-201ENST00000423705 938 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 TPTE2P1-204ENST00000435256 593 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFRAP16234 AC015983.1-201ENST00000441577 373 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFRAP16234 CR383656.1-201ENST00000484916 377 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.1□□□□□ -1.43
PDGFRAP16234 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.1□□□□□ -1.43
PDGFRAP16234 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
PDGFRAP16234 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFRAP16234 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.1□□□□□ -1.43
PDGFRAP16234 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFRAP16234 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFRAP16234 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 AL138960.1-201ENST00000613838 513 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFRAP16234 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFRAP16234 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFRAP16234 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PDGFRAP16234 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PDGFRAP16234 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PDGFRAP16234 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.09□□□□□ -1.43
PDGFRAP16234 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PDGFRAP16234 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.09□□□□□ -1.43
PDGFRAP16234 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFRAP16234 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.09□□□□□ -1.43
PDGFRAP16234 AL590399.2-201ENST00000427536 309 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 AC126120.1-201ENST00000431082 470 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 KRT8P51-201ENST00000438938 274 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFRAP16234 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFRAP16234 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.09□□□□□ -1.43
PDGFRAP16234 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.09□□□□□ -1.43
PDGFRAP16234 AC093166.4-201ENST00000457867 318 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.09□□□□□ -1.43
PDGFRAP16234 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 UGT2A3P7-201ENST00000510485 734 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFRAP16234 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.09□□□□□ -1.43
PDGFRAP16234 AC025857.1-201ENST00000525252 377 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.09□□□□□ -1.43
PDGFRAP16234 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFRAP16234 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFRAP16234 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFRAP16234 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.09□□□□□ -1.43
PDGFRAP16234 MIR4420-201ENST00000583944 77 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 AC027243.2-201ENST00000602530 724 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 AL513327.3-201ENST00000602618 469 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 RNU6-84P-201ENST00000607737 102 ntBASIC6.09□□□□□ -1.43
PDGFRAP16234 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.09□□□□□ -1.43
PDGFRAP16234 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
PDGFRAP16234 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.09□□□□□ -1.43
PDGFRAP16234 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFRAP16234 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.09□□□□□ -1.43
PDGFRAP16234 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.09□□□□□ -1.44
PDGFRAP16234 MTCO1P7-201ENST00000419523 1542 ntBASIC6.09□□□□□ -1.44
PDGFRAP16234 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
PDGFRAP16234 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PDGFRAP16234 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PDGFRAP16234 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.09□□□□□ -1.44
PDGFRAP16234 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms