Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC6P09630 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC6P09630 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC6P09630 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HOXC6P09630 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC6P09630 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC6P09630 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC6P09630 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HOXC6P09630 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC6P09630 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC6P09630 SNORA70H-201ENST00000383910 135 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 SNORA70J-201ENST00000384182 135 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 RN7SKP273-201ENST00000411392 314 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.52□□□□□ -1.37
HOXC6P09630 AC019185.1-201ENST00000442718 389 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC6P09630 RNU1-88P-201ENST00000459274 128 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 AL603882.1-201ENST00000463059 681 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC6P09630 RPS21P4-201ENST00000487122 248 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 AL035690.1-201ENST00000490892 383 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC6P09630 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC6P09630 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC6P09630 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC6P09630 AC084033.1-201ENST00000550830 633 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC6P09630 PPATP2-201ENST00000605635 508 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC6P09630 AC136428.4-201ENST00000634254 1155 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC6P09630 AL596275.2-208ENST00000641192 594 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC6P09630 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC6P09630 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC6P09630 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC6P09630 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HOXC6P09630 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC6P09630 AL591135.1-201ENST00000401578 5914 ntBASIC6.52□□□□□ -1.37
HOXC6P09630 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC6P09630 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HOXC6P09630 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC6P09630 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC6P09630 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXC6P09630 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HOXC6P09630 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC6P09630 RNA5SP507-201ENST00000363603 121 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 RNA5SP30-201ENST00000365552 115 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC6P09630 AL133270.1-201ENST00000402635 279 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC6P09630 NPM1P36-201ENST00000415681 835 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 OR5W1P-201ENST00000423705 938 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 AC015983.1-201ENST00000441577 373 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 RPL7P45-201ENST00000455851 743 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 AC004453.1-201ENST00000487895 408 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 FTH1P8-201ENST00000498161 514 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 PGAM1P13-201ENST00000507497 754 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXC6P09630 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXC6P09630 AL049779.2-201ENST00000553847 315 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 AL049779.3-201ENST00000557141 606 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 MRPS21P7-201ENST00000566937 238 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 AL163952.1-202ENST00000569625 600 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 AC024940.4-201ENST00000605507 246 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 AC004890.3-201ENST00000605566 1095 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 AC116651.1-201ENST00000609724 556 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXC6P09630 AC068870.2-201ENST00000620635 389 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HOXC6P09630 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXC6P09630 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXC6P09630 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC6P09630 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC6P09630 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXC6P09630 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC6P09630 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
HOXC6P09630 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC6P09630 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC6P09630 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXC6P09630 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
HOXC6P09630 AC130304.1-201ENST00000622942 2385 ntBASIC6.51□□□□□ -1.37
HOXC6P09630 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HOXC6P09630 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXC6P09630 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXC6P09630 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXC6P09630 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HOXC6P09630 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HOXC6P09630 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HOXC6P09630 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
HOXC6P09630 AC114876.1-201ENST00000490962 1366 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HOXC6P09630 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC6P09630 AC005042.1-201ENST00000393397 800 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 AL360271.1-201ENST00000395679 510 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 RPL35AP24-201ENST00000413846 330 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 NIFKP3-201ENST00000417799 865 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXC6P09630 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC6P09630 RPL7L1P9-201ENST00000431298 745 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms