Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLTAP09496 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CLTAP09496 RNA5SP122-201ENST00000384457 108 ntBASIC6.3□□□□□ -1.4
CLTAP09496 AC093155.2-201ENST00000420734 937 ntBASIC6.3□□□□□ -1.4
CLTAP09496 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLTAP09496 AC127526.2-201ENST00000426436 775 ntBASIC6.3□□□□□ -1.4
CLTAP09496 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.3□□□□□ -1.4
CLTAP09496 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.3□□□□□ -1.4
CLTAP09496 NXT1P1-201ENST00000458481 316 ntBASIC6.3□□□□□ -1.4
CLTAP09496 AC108751.3-201ENST00000461814 1020 ntBASIC6.3□□□□□ -1.4
CLTAP09496 AC079080.1-201ENST00000479841 822 ntBASIC6.3□□□□□ -1.4
CLTAP09496 RN7SL284P-201ENST00000498823 275 ntBASIC6.3□□□□□ -1.4
CLTAP09496 MTATP6P1-201ENST00000514057 681 ntBASIC6.3□□□□□ -1.4
CLTAP09496 CYCSP22-201ENST00000517555 339 ntBASIC6.3□□□□□ -1.4
CLTAP09496 AC136777.2-201ENST00000522979 358 ntBASIC6.3□□□□□ -1.4
CLTAP09496 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.3□□□□□ -1.4
CLTAP09496 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.3□□□□□ -1.4
CLTAP09496 AC135626.1-201ENST00000556983 435 ntBASIC6.3□□□□□ -1.4
CLTAP09496 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CLTAP09496 RN7SL544P-201ENST00000617232 284 ntBASIC6.3□□□□□ -1.4
CLTAP09496 RN7SL763P-201ENST00000620922 284 ntBASIC6.3□□□□□ -1.4
CLTAP09496 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.3□□□□□ -1.4
CLTAP09496 AC103703.1-201ENST00000634783 663 ntBASIC6.3□□□□□ -1.4
CLTAP09496 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CLTAP09496 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.3□□□□□ -1.4
CLTAP09496 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.3□□□□□ -1.4
CLTAP09496 MIR193BHG-214ENST00000641765 509 ntBASIC6.3□□□□□ -1.4
CLTAP09496 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLTAP09496 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.3□□□□□ -1.4
CLTAP09496 FBXL21-201ENST00000297158 1305 ntBASIC6.29□□□□□ -1.4
CLTAP09496 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
CLTAP09496 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLTAP09496 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CLTAP09496 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CLTAP09496 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLTAP09496 AL357752.1-201ENST00000412817 349 ntBASIC6.29□□□□□ -1.4
CLTAP09496 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.29□□□□□ -1.4
CLTAP09496 AL022331.1-201ENST00000429025 477 ntBASIC6.29□□□□□ -1.4
CLTAP09496 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.29□□□□□ -1.4
CLTAP09496 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.29□□□□□ -1.4
CLTAP09496 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.29□□□□□ -1.4
CLTAP09496 AL161636.2-201ENST00000445179 927 ntBASIC6.29□□□□□ -1.4
CLTAP09496 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.29□□□□□ -1.4
CLTAP09496 AC004129.2-201ENST00000457229 287 ntBASIC6.29□□□□□ -1.4
CLTAP09496 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.29□□□□□ -1.4
CLTAP09496 AC006539.1-201ENST00000481419 501 ntBASIC6.29□□□□□ -1.4
CLTAP09496 AC022215.1-201ENST00000481770 362 ntBASIC6.29□□□□□ -1.4
CLTAP09496 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CLTAP09496 RPL7P51-201ENST00000490532 749 ntBASIC6.29□□□□□ -1.4
CLTAP09496 MTND5P12-201ENST00000502851 1449 ntBASIC6.29□□□□□ -1.4
CLTAP09496 SCARNA6.1-201ENST00000516989 238 ntBASIC6.29□□□□□ -1.4
CLTAP09496 AC139365.2-201ENST00000517972 253 ntBASIC6.29□□□□□ -1.4
CLTAP09496 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLTAP09496 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.29□□□□□ -1.4
CLTAP09496 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.29□□□□□ -1.4
CLTAP09496 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.29□□□□□ -1.4
CLTAP09496 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.29□□□□□ -1.4
CLTAP09496 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.29□□□□□ -1.4
CLTAP09496 AC025857.2-201ENST00000602711 238 ntBASIC6.29□□□□□ -1.4
CLTAP09496 AC087565.3-203ENST00000641018 837 ntBASIC6.29□□□□□ -1.4
CLTAP09496 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLTAP09496 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.29□□□□□ -1.4
CLTAP09496 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CLTAP09496 KARSP1-201ENST00000451871 1752 ntBASIC6.29□□□□□ -1.4
CLTAP09496 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLTAP09496 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.28□□□□□ -1.4
CLTAP09496 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.28□□□□□ -1.4
CLTAP09496 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.28□□□□□ -1.4
CLTAP09496 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLTAP09496 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.28□□□□□ -1.4
CLTAP09496 MFSD8-219ENST00000641228 2559 ntBASIC6.28□□□□□ -1.4
CLTAP09496 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.28□□□□□ -1.4
CLTAP09496 AP004607.3-201ENST00000530354 3915 ntBASIC6.28□□□□□ -1.4
CLTAP09496 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
CLTAP09496 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLTAP09496 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CLTAP09496 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CLTAP09496 RNA5SP435-201ENST00000364044 108 ntBASIC6.28□□□□□ -1.4
CLTAP09496 RNA5SP394-201ENST00000364216 119 ntBASIC6.28□□□□□ -1.4
CLTAP09496 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLTAP09496 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CLTAP09496 HMGB1P20-201ENST00000402555 677 ntBASIC6.28□□□□□ -1.4
CLTAP09496 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.28□□□□□ -1.4
CLTAP09496 RPL34P3-201ENST00000421454 338 ntBASIC6.28□□□□□ -1.4
CLTAP09496 HMGB3P24-201ENST00000433260 622 ntBASIC6.28□□□□□ -1.4
CLTAP09496 HMGN1P36-201ENST00000446623 298 ntBASIC6.28□□□□□ -1.4
CLTAP09496 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.28□□□□□ -1.4
CLTAP09496 SETP20-201ENST00000457046 852 ntBASIC6.28□□□□□ -1.4
CLTAP09496 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLTAP09496 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.28□□□□□ -1.4
CLTAP09496 AC009120.1-201ENST00000493458 473 ntBASIC6.28□□□□□ -1.4
CLTAP09496 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.28□□□□□ -1.4
CLTAP09496 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.28□□□□□ -1.4
CLTAP09496 AC021678.3-201ENST00000517893 476 ntBASIC6.28□□□□□ -1.4
CLTAP09496 AC078899.1-201ENST00000521432 1185 ntBASIC6.28□□□□□ -1.4
CLTAP09496 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.28□□□□□ -1.4
CLTAP09496 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.28□□□□□ -1.4
CLTAP09496 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.28□□□□□ -1.4
CLTAP09496 NPM1P42-201ENST00000560329 862 ntBASIC6.28□□□□□ -1.4
CLTAP09496 AL163952.1-202ENST00000569625 600 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms