Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 SPATA31C1-201ENST00000420021 3895 ntBASIC3.35□□□□□ -1.87
APOBP04114 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
APOBP04114 RN7SKP126-201ENST00000411143 300 ntBASIC3.35□□□□□ -1.87
APOBP04114 AC096921.1-201ENST00000411661 375 ntBASIC3.35□□□□□ -1.87
APOBP04114 EI24P4-201ENST00000423683 1078 ntBASIC3.35□□□□□ -1.87
APOBP04114 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBP04114 AC239367.2-201ENST00000447309 705 ntBASIC3.35□□□□□ -1.87
APOBP04114 COX6B1P5-201ENST00000509843 249 ntBASIC3.35□□□□□ -1.87
APOBP04114 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBP04114 RN7SKP147-201ENST00000517154 244 ntBASIC3.35□□□□□ -1.87
APOBP04114 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.35□□□□□ -1.87
APOBP04114 MIR132-201ENST00000591554 101 ntBASIC3.35□□□□□ -1.87
APOBP04114 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.35□□□□□ -1.87
APOBP04114 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
APOBP04114 AC069213.2-201ENST00000420238 366 ntBASIC3.35□□□□□ -1.87
APOBP04114 RPEP3-201ENST00000425462 676 ntBASIC3.35□□□□□ -1.87
APOBP04114 MED28P3-201ENST00000444288 531 ntBASIC3.35□□□□□ -1.87
APOBP04114 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBP04114 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBP04114 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBP04114 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 NXF4-202ENST00000416098 1465 ntBASIC3.35□□□□□ -1.87
APOBP04114 AC006600.2-201ENST00000624834 2506 ntBASIC3.35□□□□□ -1.87
APOBP04114 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
APOBP04114 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 RNU4-39P-201ENST00000362455 127 ntBASIC3.34□□□□□ -1.87
APOBP04114 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
APOBP04114 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC3.34□□□□□ -1.87
APOBP04114 RPL7AP10-201ENST00000481016 791 ntBASIC3.34□□□□□ -1.87
APOBP04114 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.34□□□□□ -1.87
APOBP04114 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.34□□□□□ -1.87
APOBP04114 AC005341.1-201ENST00000571086 708 ntBASIC3.34□□□□□ -1.87
APOBP04114 AC020765.1-201ENST00000604296 328 ntBASIC3.34□□□□□ -1.87
APOBP04114 AC092653.1-201ENST00000608509 531 ntBASIC3.34□□□□□ -1.87
APOBP04114 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC3.34□□□□□ -1.87
APOBP04114 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC3.34□□□□□ -1.87
APOBP04114 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC3.34□□□□□ -1.87
APOBP04114 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 AC016251.2-201ENST00000623393 3089 ntBASIC3.34□□□□□ -1.87
APOBP04114 AC092747.4-201ENST00000620519 1861 ntBASIC3.34□□□□□ -1.87
APOBP04114 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 ZNF969P-201ENST00000510345 2341 ntBASIC3.34□□□□□ -1.87
APOBP04114 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.87
APOBP04114 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC3.34□□□□□ -1.87
APOBP04114 AC104964.3-201ENST00000606115 2860 ntBASIC3.34□□□□□ -1.87
APOBP04114 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC3.34□□□□□ -1.87
APOBP04114 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
APOBP04114 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
APOBP04114 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
APOBP04114 MIR134-201ENST00000385258 73 ntBASIC3.34□□□□□ -1.87
APOBP04114 LINC01881-201ENST00000416103 412 ntBASIC3.34□□□□□ -1.87
APOBP04114 AC023818.1-201ENST00000498379 384 ntBASIC3.34□□□□□ -1.87
APOBP04114 RN7SKP99-201ENST00000517028 307 ntBASIC3.34□□□□□ -1.87
APOBP04114 HMGB1P40-201ENST00000525121 540 ntBASIC3.34□□□□□ -1.87
APOBP04114 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
APOBP04114 BNIP3P33-201ENST00000598912 569 ntBASIC3.34□□□□□ -1.87
APOBP04114 AC103792.1-201ENST00000603591 919 ntBASIC3.34□□□□□ -1.87
APOBP04114 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC3.34□□□□□ -1.87
APOBP04114 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
APOBP04114 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC3.34□□□□□ -1.87
APOBP04114 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
APOBP04114 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC3.34□□□□□ -1.87
APOBP04114 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
APOBP04114 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC3.34□□□□□ -1.87
APOBP04114 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 DDX39BP1-205ENST00000422507 192 ntBASIC3.34□□□□□ -1.87
APOBP04114 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.34□□□□□ -1.87
APOBP04114 AC112498.1-201ENST00000444401 332 ntBASIC3.34□□□□□ -1.87
APOBP04114 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC3.34□□□□□ -1.87
APOBP04114 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.34□□□□□ -1.87
APOBP04114 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms