Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
CHRNA1P02708 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA1P02708 AC005225.5-201ENST00000623547 2225 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA1P02708 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA1P02708 AC006511.3-201ENST00000624929 1783 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.28□□□□□ -1.4
CHRNA1P02708 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA1P02708 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.28□□□□□ -1.4
CHRNA1P02708 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA1P02708 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA1P02708 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.28□□□□□ -1.4
CHRNA1P02708 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA1P02708 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.28□□□□□ -1.4
CHRNA1P02708 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
CHRNA1P02708 MIR1286-201ENST00000408112 78 ntBASIC6.28□□□□□ -1.4
CHRNA1P02708 RPL35AP24-201ENST00000413846 330 ntBASIC6.28□□□□□ -1.4
CHRNA1P02708 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.28□□□□□ -1.4
CHRNA1P02708 AC019185.1-201ENST00000442718 389 ntBASIC6.28□□□□□ -1.4
CHRNA1P02708 AL035690.1-201ENST00000490892 383 ntBASIC6.28□□□□□ -1.4
CHRNA1P02708 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.28□□□□□ -1.4
CHRNA1P02708 RNA5SP92-201ENST00000516437 110 ntBASIC6.28□□□□□ -1.4
CHRNA1P02708 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.28□□□□□ -1.4
CHRNA1P02708 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.28□□□□□ -1.4
CHRNA1P02708 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.28□□□□□ -1.4
CHRNA1P02708 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.28□□□□□ -1.4
CHRNA1P02708 SUGT1P3-202ENST00000604259 383 ntBASIC6.28□□□□□ -1.4
CHRNA1P02708 AL590763.1-201ENST00000398297 1545 ntBASIC6.28□□□□□ -1.4
CHRNA1P02708 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CHRNA1P02708 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA1P02708 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.27□□□□□ -1.4
CHRNA1P02708 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
CHRNA1P02708 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.27□□□□□ -1.4
CHRNA1P02708 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 AL442128.2-201ENST00000620246 1824 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CHRNA1P02708 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.27□□□□□ -1.41
CHRNA1P02708 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 RNU1-19P-201ENST00000363306 165 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 GAPDHP42-201ENST00000406848 981 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 RNU4-34P-201ENST00000410431 124 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 RNU6-233P-201ENST00000410845 141 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 AP000534.2-201ENST00000412729 568 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 RPS17P17-201ENST00000419392 409 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.27□□□□□ -1.41
CHRNA1P02708 OR7E116P-201ENST00000448529 957 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.27□□□□□ -1.41
CHRNA1P02708 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.27□□□□□ -1.41
CHRNA1P02708 EIF1P7-201ENST00000487533 337 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.27□□□□□ -1.41
CHRNA1P02708 AC074255.1-201ENST00000511259 501 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.27□□□□□ -1.41
CHRNA1P02708 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.27□□□□□ -1.41
CHRNA1P02708 AC244502.2-201ENST00000543361 851 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.27□□□□□ -1.41
CHRNA1P02708 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.27□□□□□ -1.41
CHRNA1P02708 MRPS21P7-201ENST00000566937 238 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.27□□□□□ -1.41
CHRNA1P02708 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.27□□□□□ -1.41
CHRNA1P02708 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 AC021422.1-201ENST00000621212 473 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 AC021766.1-201ENST00000624404 741 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 CASC19-264ENST00000641912 1184 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 TTC41P-205ENST00000551270 3963 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CHRNA1P02708 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 PABPC1P6-201ENST00000445594 1829 ntBASIC6.27□□□□□ -1.41
CHRNA1P02708 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA1P02708 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CHRNA1P02708 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.27□□□□□ -1.41
CHRNA1P02708 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 FBXL21-201ENST00000297158 1305 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 AC117409.1-201ENST00000470499 1310 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 AP004607.3-201ENST00000530354 3915 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
CHRNA1P02708 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 RNA5SP30-201ENST00000365552 115 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.26□□□□□ -1.41
CHRNA1P02708 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 AC009804.1-201ENST00000400949 179 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms