Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MTND2P21-201ENST00000436242 1042 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.51□□□□□ -1.53
NKX2-2O95096 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX2-2O95096 SUMO2P1-206ENST00000445436 284 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AC005077.1-201ENST00000449226 375 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 PFN1P6-201ENST00000476786 399 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AC008629.2-201ENST00000503783 483 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 SUMO2P4-201ENST00000504193 276 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AC027338.1-201ENST00000514840 825 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 snoU109.5-201ENST00000516231 132 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.51□□□□□ -1.53
NKX2-2O95096 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AC007346.2-201ENST00000564816 892 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AC006115.2-201ENST00000596823 202 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.51□□□□□ -1.53
NKX2-2O95096 BMS1P7-201ENST00000602440 1052 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AC098483.2-201ENST00000603158 454 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX2-2O95096 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AL450270.1-201ENST00000606160 391 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AL136131.3-201ENST00000607600 188 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AC016542.1-201ENST00000608259 493 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AC006213.4-201ENST00000616184 634 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX2-2O95096 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AC096708.4-201ENST00000620563 552 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AC006249.1-201ENST00000621223 471 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AP001052.1-201ENST00000626421 99 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
NKX2-2O95096 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX2-2O95096 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AC034229.2-201ENST00000566945 2508 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX2-2O95096 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NKX2-2O95096 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NKX2-2O95096 AC009501.3-201ENST00000605001 1352 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.51□□□□□ -1.53
NKX2-2O95096 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX2-2O95096 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX2-2O95096 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.51□□□□□ -1.53
NKX2-2O95096 AL161756.3-201ENST00000641216 2071 ntBASIC5.51□□□□□ -1.53
NKX2-2O95096 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX2-2O95096 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX2-2O95096 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NKX2-2O95096 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-2O95096 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NKX2-2O95096 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-2O95096 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-2O95096 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.5□□□□□ -1.53
NKX2-2O95096 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NKX2-2O95096 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-2O95096 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-2O95096 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-2O95096 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NKX2-2O95096 SELENOWP1-201ENST00000322792 252 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-2O95096 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NKX2-2O95096 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX2-2O95096 Z86062.1-201ENST00000406773 777 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX2-2O95096 RPS4XP5-201ENST00000419038 768 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.5□□□□□ -1.53
NKX2-2O95096 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 SDR42E1P3-201ENST00000438345 502 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 AL663074.2-201ENST00000440621 479 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 RPSAP40-201ENST00000442343 891 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 BMS1P10-201ENST00000443754 1120 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 CFL1P4-201ENST00000451536 498 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 PPIAP27-201ENST00000453800 265 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 GEMIN2P1-201ENST00000454246 752 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 OSTCP1-201ENST00000455507 450 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 AC098847.1-201ENST00000473094 348 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 LARP7P4-201ENST00000481075 878 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 OR9N1P-202ENST00000494289 481 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-2O95096 RBBP4P1-201ENST00000502424 1276 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 HMGB1P3-201ENST00000502802 616 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 UGT2A3P7-201ENST00000510485 734 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX2-2O95096 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX2-2O95096 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX2-2O95096 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.5□□□□□ -1.53
NKX2-2O95096 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.5□□□□□ -1.53
NKX2-2O95096 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.5□□□□□ -1.53
NKX2-2O95096 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX2-2O95096 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NKX2-2O95096 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms