Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK1BO75841 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
UPK1BO75841 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1BO75841 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
UPK1BO75841 RN7SKP125-201ENST00000410481 302 ntBASIC4.8□□□□□ -1.64
UPK1BO75841 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK1BO75841 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK1BO75841 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.8□□□□□ -1.64
UPK1BO75841 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.8□□□□□ -1.64
UPK1BO75841 AC090018.1-201ENST00000434369 367 ntBASIC4.8□□□□□ -1.64
UPK1BO75841 AC046176.1-201ENST00000435260 1170 ntBASIC4.8□□□□□ -1.64
UPK1BO75841 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
UPK1BO75841 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK1BO75841 RN7SL447P-201ENST00000494711 245 ntBASIC4.8□□□□□ -1.64
UPK1BO75841 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1BO75841 ARL4AP1-201ENST00000503220 705 ntBASIC4.8□□□□□ -1.64
UPK1BO75841 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK1BO75841 HMGB1P19-201ENST00000517578 577 ntBASIC4.8□□□□□ -1.64
UPK1BO75841 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK1BO75841 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK1BO75841 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK1BO75841 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK1BO75841 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1BO75841 AC026898.1-201ENST00000586404 571 ntBASIC4.8□□□□□ -1.64
UPK1BO75841 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.8□□□□□ -1.64
UPK1BO75841 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1BO75841 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1BO75841 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
UPK1BO75841 AC124944.3-204ENST00000641191 150 ntBASIC4.8□□□□□ -1.64
UPK1BO75841 OR11H2-202ENST00000641517 1085 ntBASIC4.8□□□□□ -1.64
UPK1BO75841 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.8□□□□□ -1.64
UPK1BO75841 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1BO75841 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
UPK1BO75841 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1BO75841 CASC19-255ENST00000641733 1385 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1BO75841 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1BO75841 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
UPK1BO75841 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
UPK1BO75841 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1BO75841 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1BO75841 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.79□□□□□ -1.64
UPK1BO75841 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1BO75841 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
UPK1BO75841 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1BO75841 RNU6-673P-201ENST00000365084 104 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1BO75841 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.79□□□□□ -1.64
UPK1BO75841 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1BO75841 RN7SKP199-201ENST00000410325 305 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.79□□□□□ -1.64
UPK1BO75841 FAM183DP-201ENST00000421987 399 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK1BO75841 AC094019.1-201ENST00000434678 472 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 CHCHD4P5-201ENST00000436684 427 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 CXCR2P1-202ENST00000443392 1074 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK1BO75841 RPS18P1-201ENST00000447840 458 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 AL596266.1-201ENST00000448132 400 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK1BO75841 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK1BO75841 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK1BO75841 OR11I1P-201ENST00000486033 954 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 AL079303.1-201ENST00000486611 463 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 RN7SL239P-201ENST00000490061 300 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 RN7SL350P-201ENST00000492591 299 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 RN7SL776P-201ENST00000493390 268 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 RPL15P21-201ENST00000495592 567 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 RPS24P16-201ENST00000497294 392 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.79□□□□□ -1.64
UPK1BO75841 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.79□□□□□ -1.64
UPK1BO75841 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK1BO75841 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK1BO75841 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.79□□□□□ -1.64
UPK1BO75841 AC023080.1-201ENST00000551663 931 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.79□□□□□ -1.64
UPK1BO75841 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK1BO75841 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK1BO75841 OR1E3-201ENST00000575608 948 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK1BO75841 AL132821.1-201ENST00000616029 394 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 RN7SL820P-201ENST00000616437 299 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 MIR6839-201ENST00000620425 113 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 MIR6503-201ENST00000622884 86 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.79□□□□□ -1.64
UPK1BO75841 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK1BO75841 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK1BO75841 AL513548.1-201ENST00000562904 1724 ntBASIC4.79□□□□□ -1.64
UPK1BO75841 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1BO75841 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.79□□□□□ -1.64
UPK1BO75841 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms