Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SDCBPO00560 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.78□□□□□ -1.64
SDCBPO00560 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SDCBPO00560 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SDCBPO00560 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.78□□□□□ -1.64
SDCBPO00560 RNFT1P3-201ENST00000340898 1052 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 AL121886.1-201ENST00000358609 435 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SDCBPO00560 AC005042.1-201ENST00000393397 800 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.78□□□□□ -1.64
SDCBPO00560 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.78□□□□□ -1.64
SDCBPO00560 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.78□□□□□ -1.64
SDCBPO00560 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.78□□□□□ -1.64
SDCBPO00560 EIF5AP4-201ENST00000441206 465 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 LINC02210-201ENST00000444561 288 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.78□□□□□ -1.64
SDCBPO00560 AL122020.1-201ENST00000472287 459 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SDCBPO00560 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.78□□□□□ -1.64
SDCBPO00560 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 RNA5SP340-201ENST00000517132 107 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 AC011853.1-201ENST00000518911 454 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.78□□□□□ -1.64
SDCBPO00560 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.78□□□□□ -1.64
SDCBPO00560 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.78□□□□□ -1.64
SDCBPO00560 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.78□□□□□ -1.64
SDCBPO00560 CYCSP38-201ENST00000559840 322 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SDCBPO00560 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.78□□□□□ -1.64
SDCBPO00560 AC125494.2-201ENST00000602431 657 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 FAM27E4-201ENST00000605259 342 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.78□□□□□ -1.64
SDCBPO00560 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SDCBPO00560 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
SDCBPO00560 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.78□□□□□ -1.64
SDCBPO00560 CAP1P2-201ENST00000417455 1409 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.78□□□□□ -1.64
SDCBPO00560 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SDCBPO00560 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.78□□□□□ -1.64
SDCBPO00560 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SDCBPO00560 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SDCBPO00560 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SDCBPO00560 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.78□□□□□ -1.64
SDCBPO00560 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.78□□□□□ -1.64
SDCBPO00560 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SDCBPO00560 PDZK1P1-202ENST00000425209 1350 ntBASIC4.78□□□□□ -1.64
SDCBPO00560 AL034546.1-201ENST00000623740 3693 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SDCBPO00560 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.77□□□□□ -1.65
SDCBPO00560 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SDCBPO00560 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SDCBPO00560 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SDCBPO00560 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SDCBPO00560 AC092681.1-201ENST00000297369 291 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SDCBPO00560 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SDCBPO00560 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SDCBPO00560 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.77□□□□□ -1.65
SDCBPO00560 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SDCBPO00560 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SDCBPO00560 AL096711.1-201ENST00000404780 554 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 RNA5SP431-201ENST00000410312 120 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 BX284632.2-201ENST00000421091 399 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 BX119904.3-201ENST00000428194 957 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 TMEM183AP1-205ENST00000432739 290 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 AC007679.3-201ENST00000434035 414 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 RPL5P25-201ENST00000441148 775 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 AL512605.1-202ENST00000441919 381 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.77□□□□□ -1.65
SDCBPO00560 AL359955.2-201ENST00000445380 353 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 YRDCP3-201ENST00000456507 480 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 CST12P-201ENST00000457644 362 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 AC093166.4-201ENST00000457867 318 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 SNORD125-201ENST00000459538 96 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 RPS23P2-201ENST00000463671 415 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 AC005165.2-201ENST00000466070 380 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 RPS17P5-201ENST00000498293 408 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.77□□□□□ -1.65
SDCBPO00560 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.77□□□□□ -1.65
SDCBPO00560 OR4A17P-201ENST00000526032 904 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 PCNAP4-201ENST00000532690 730 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 AC006512.2-201ENST00000543250 486 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 AC079905.1-201ENST00000549280 475 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.77□□□□□ -1.65
SDCBPO00560 AC091078.2-201ENST00000557145 559 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.77□□□□□ -1.65
SDCBPO00560 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.77□□□□□ -1.65
SDCBPO00560 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.77□□□□□ -1.65
SDCBPO00560 MIR4260-201ENST00000583107 67 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.77□□□□□ -1.65
SDCBPO00560 AL162574.1-201ENST00000615702 950 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 AL591926.1-201ENST00000620542 217 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 AC021766.1-201ENST00000624404 741 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SDCBPO00560 AC026523.2-201ENST00000625039 7739 ntBASIC4.77□□□□□ -1.65
SDCBPO00560 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SDCBPO00560 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SDCBPO00560 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms