Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC005828.7-201ENST00000607331 556 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 AC092266.1-201ENST00000610958 165 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 MIR6809-201ENST00000612189 116 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 RNA5SP439-201ENST00000617595 124 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC28A1O00337 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC093225.1-201ENST00000506867 1408 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 CASC19-260ENST00000641828 2001 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC28A1O00337 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AL354854.1-201ENST00000455940 1363 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC28A1O00337 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC28A1O00337 AC092451.3-201ENST00000625067 1343 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SLC28A1O00337 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC28A1O00337 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC28A1O00337 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC28A1O00337 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC28A1O00337 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC28A1O00337 Z83820.1-201ENST00000456978 1499 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC28A1O00337 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC28A1O00337 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SLC28A1O00337 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.54□□□□□ -1.52
SLC28A1O00337 RNA5SP279-201ENST00000365513 117 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 MIR130B-202ENST00000385018 82 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SLC28A1O00337 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SLC28A1O00337 AL691447.1-201ENST00000419456 387 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 AC009506.2-201ENST00000420635 840 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.54□□□□□ -1.52
SLC28A1O00337 FCF1P7-201ENST00000451185 558 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 AC044810.1-201ENST00000480271 711 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
SLC28A1O00337 AC091874.2-201ENST00000505889 720 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC28A1O00337 RN7SKP35-201ENST00000517210 151 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 AC008676.3-201ENST00000521237 435 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC28A1O00337 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.54□□□□□ -1.52
SLC28A1O00337 AC137627.1-201ENST00000545761 289 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC28A1O00337 AC023389.2-201ENST00000580031 955 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 MIR4776-2-201ENST00000580204 80 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC28A1O00337 MIR4260-201ENST00000583107 67 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC28A1O00337 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC28A1O00337 COX6CP7-201ENST00000597056 208 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC28A1O00337 AC124916.2-201ENST00000604416 224 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 AC243960.7-201ENST00000623532 707 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC28A1O00337 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC28A1O00337 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC28A1O00337 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC28A1O00337 AC027088.4-201ENST00000611559 1947 ntBASIC5.54□□□□□ -1.52
SLC28A1O00337 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.54□□□□□ -1.52
SLC28A1O00337 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 GVINP1-202ENST00000531871 7271 ntBASIC5.53□□□□□ -1.52
SLC28A1O00337 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC28A1O00337 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 DDX18P6-201ENST00000450119 1997 ntBASIC5.53□□□□□ -1.52
SLC28A1O00337 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC28A1O00337 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC28A1O00337 Y_RNA.62-201ENST00000362840 99 ntBASIC5.53□□□□□ -1.52
SLC28A1O00337 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC28A1O00337 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC28A1O00337 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC28A1O00337 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC28A1O00337 RNF10P1-201ENST00000418589 369 ntBASIC5.53□□□□□ -1.52
SLC28A1O00337 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC28A1O00337 AC023271.1-201ENST00000445936 1090 ntBASIC5.53□□□□□ -1.52
SLC28A1O00337 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC28A1O00337 RN7SL612P-201ENST00000497704 295 ntBASIC5.53□□□□□ -1.52
SLC28A1O00337 SUMO2P4-201ENST00000504193 276 ntBASIC5.53□□□□□ -1.52
SLC28A1O00337 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC28A1O00337 AC026782.2-201ENST00000510845 636 ntBASIC5.53□□□□□ -1.52
SLC28A1O00337 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC28A1O00337 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.53□□□□□ -1.52
SLC28A1O00337 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC28A1O00337 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms