Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 SNORA51.1-201ENST00000363243 140 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AC007068.1-201ENST00000396690 844 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AL512593.1-201ENST00000444758 779 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AL445665.1-202ENST00000452436 324 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 RPL23AP40-201ENST00000487630 390 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AC016839.1-201ENST00000578162 867 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 COX6CP7-201ENST00000597056 208 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 LSM1P2-201ENST00000604911 322 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AL136131.3-201ENST00000607600 188 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AL031658.2-201ENST00000616850 651 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AP005431.1-201ENST00000618479 319 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AL121768.1-201ENST00000613917 2544 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AC123769.1-201ENST00000530992 3192 ntBASIC5.41□□□□□ -1.54
NPIPA3F8WFD2 AC016583.1-201ENST00000624221 2431 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AC083837.1-201ENST00000565297 2994 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 PARP4P2-201ENST00000446672 3326 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 MTCO1P11-201ENST00000429111 1528 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 MTHFD2P5-201ENST00000320415 844 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 OR2W4P-201ENST00000406496 926 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 RPL35AP3-201ENST00000414680 288 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 BX119321.1-201ENST00000428912 797 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AL731534.1-201ENST00000434711 269 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 HMGN1P36-201ENST00000446623 298 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 GEMIN2P1-201ENST00000454246 752 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AL356390.1-201ENST00000455684 397 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AL445687.2-201ENST00000458156 728 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AC012123.2-201ENST00000485809 248 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 CCDC11P1-201ENST00000503137 1162 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AC026782.2-201ENST00000510845 636 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 RN7SKP248-201ENST00000516278 305 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AC027544.3-201ENST00000535082 757 ntBASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA3F8WFD2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
NPIPA3F8WFD2 AC093297.3-201ENST00000607056 2517 ntBASIC5.4□□□□□ -1.55
NPIPA3F8WFD2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
NPIPA3F8WFD2 AL355377.1-201ENST00000621125 1653 ntBASIC5.4□□□□□ -1.55
NPIPA3F8WFD2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NPIPA3F8WFD2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.39□□□□□ -1.55
NPIPA3F8WFD2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA3F8WFD2 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA3F8WFD2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
NPIPA3F8WFD2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA3F8WFD2 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
NPIPA3F8WFD2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
NPIPA3F8WFD2 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA3F8WFD2 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NPIPA3F8WFD2 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms