Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC29.91■■■□□ 2.38
CDC42BPBQ9Y5S2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC29.91■■■□□ 2.38
CDC42BPBQ9Y5S2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDC42BPBQ9Y5S2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CDC42BPBQ9Y5S2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CDC42BPBQ9Y5S2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC29.91■■■□□ 2.38
CDC42BPBQ9Y5S2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC29.91■■■□□ 2.38
CDC42BPBQ9Y5S2 DBP-204ENST00000599385 709 ntTSL 3 BASIC29.91■■■□□ 2.38
CDC42BPBQ9Y5S2 BX119927.1-201ENST00000636596 1552 ntBASIC29.91■■■□□ 2.38
CDC42BPBQ9Y5S2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC29.9■■■□□ 2.38
CDC42BPBQ9Y5S2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC29.9■■■□□ 2.38
CDC42BPBQ9Y5S2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDC42BPBQ9Y5S2 AC012676.1-201ENST00000574705 1949 ntBASIC29.9■■■□□ 2.38
CDC42BPBQ9Y5S2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC29.9■■■□□ 2.38
CDC42BPBQ9Y5S2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CDC42BPBQ9Y5S2 AL121956.5-201ENST00000625261 221 ntBASIC29.9■■■□□ 2.38
CDC42BPBQ9Y5S2 AC092720.2-201ENST00000602388 1665 ntBASIC29.9■■■□□ 2.38
CDC42BPBQ9Y5S2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
CDC42BPBQ9Y5S2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC29.89■■■□□ 2.38
CDC42BPBQ9Y5S2 TSPY5P-201ENST00000426936 936 ntBASIC29.89■■■□□ 2.38
CDC42BPBQ9Y5S2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC29.89■■■□□ 2.38
CDC42BPBQ9Y5S2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDC42BPBQ9Y5S2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC29.89■■■□□ 2.38
CDC42BPBQ9Y5S2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDC42BPBQ9Y5S2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDC42BPBQ9Y5S2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
CDC42BPBQ9Y5S2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
CDC42BPBQ9Y5S2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
CDC42BPBQ9Y5S2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC29.89■■■□□ 2.37
CDC42BPBQ9Y5S2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
CDC42BPBQ9Y5S2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPBQ9Y5S2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 AL441883.1-201ENST00000566170 1045 ntBASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CDC42BPBQ9Y5S2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 PCED1CP-201ENST00000419887 785 ntBASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 TSPY17P-201ENST00000450329 467 ntBASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 KRT18P56-201ENST00000507275 550 ntBASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPBQ9Y5S2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 AL023973.1-201ENST00000624619 620 ntBASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 KRT18P38-201ENST00000449496 1282 ntBASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 CA15P1-201ENST00000481698 905 ntBASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 AP003041.3-201ENST00000527151 707 ntBASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDC42BPBQ9Y5S2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms