Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 AC092667.1-201ENST00000434301 2586 ntBASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 AP001271.2-201ENST00000624018 1556 ntBASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 AL391422.3-201ENST00000603791 2761 ntBASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LINC00588Q9Y4M8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 KRT16P1-201ENST00000399124 1418 ntBASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 NUDT16P1-203ENST00000513809 620 ntBASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 AL162377.1-201ENST00000618844 1793 ntBASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00588Q9Y4M8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00588Q9Y4M8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00588Q9Y4M8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00588Q9Y4M8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00588Q9Y4M8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00588Q9Y4M8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00588Q9Y4M8 TMEM179-206ENST00000616017 1645 ntBASIC13.46□□□□□ -0.26
LINC00588Q9Y4M8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
LINC00588Q9Y4M8 AL691432.2-201ENST00000607222 2038 ntBASIC13.46□□□□□ -0.26
LINC00588Q9Y4M8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00588Q9Y4M8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC00588Q9Y4M8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00588Q9Y4M8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00588Q9Y4M8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms