Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
NINLQ9Y2I6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC26.97■■□□□ 1.91
NINLQ9Y2I6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC26.97■■□□□ 1.91
NINLQ9Y2I6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC26.97■■□□□ 1.91
NINLQ9Y2I6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC26.97■■□□□ 1.91
NINLQ9Y2I6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
NINLQ9Y2I6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC26.97■■□□□ 1.91
NINLQ9Y2I6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 MIR6786-201ENST00000616843 113 ntBASIC26.96■■□□□ 1.91
NINLQ9Y2I6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
NINLQ9Y2I6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC26.95■■□□□ 1.9
NINLQ9Y2I6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
NINLQ9Y2I6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.9
NINLQ9Y2I6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
NINLQ9Y2I6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
NINLQ9Y2I6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
NINLQ9Y2I6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC26.95■■□□□ 1.9
NINLQ9Y2I6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC26.95■■□□□ 1.9
NINLQ9Y2I6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC26.95■■□□□ 1.9
NINLQ9Y2I6 AP005242.2-201ENST00000580065 1175 ntBASIC26.95■■□□□ 1.9
NINLQ9Y2I6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC26.95■■□□□ 1.9
NINLQ9Y2I6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC26.95■■□□□ 1.9
NINLQ9Y2I6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 AC145285.6-201ENST00000604632 637 ntBASIC26.94■■□□□ 1.9
NINLQ9Y2I6 AC131212.4-201ENST00000623606 975 ntBASIC26.94■■□□□ 1.9
NINLQ9Y2I6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NINLQ9Y2I6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NINLQ9Y2I6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC26.93■■□□□ 1.9
NINLQ9Y2I6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NINLQ9Y2I6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC26.93■■□□□ 1.9
NINLQ9Y2I6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NINLQ9Y2I6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC26.93■■□□□ 1.9
NINLQ9Y2I6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC26.93■■□□□ 1.9
NINLQ9Y2I6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.93■■□□□ 1.9
NINLQ9Y2I6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.93■■□□□ 1.9
NINLQ9Y2I6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NINLQ9Y2I6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
NINLQ9Y2I6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NINLQ9Y2I6 KRT8P9-201ENST00000558927 1449 ntBASIC26.91■■□□□ 1.9
NINLQ9Y2I6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC26.91■■□□□ 1.9
NINLQ9Y2I6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NINLQ9Y2I6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NINLQ9Y2I6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NINLQ9Y2I6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NINLQ9Y2I6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NINLQ9Y2I6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NINLQ9Y2I6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.9■■□□□ 1.9
NINLQ9Y2I6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC26.9■■□□□ 1.9
NINLQ9Y2I6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NINLQ9Y2I6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC26.9■■□□□ 1.9
NINLQ9Y2I6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms