Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 FAM8A6P-201ENST00000407496 1135 ntBASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 AC091390.4-202ENST00000476426 537 ntBASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
CDK11AQ9UQ88 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 Z85996.1-201ENST00000494644 937 ntBASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 MYC-208ENST00000641036 567 ntBASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
CDK11AQ9UQ88 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CDK11AQ9UQ88 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CDK11AQ9UQ88 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
CDK11AQ9UQ88 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CDK11AQ9UQ88 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
CDK11AQ9UQ88 RNF152P1-201ENST00000397754 604 ntBASIC30.45■■■□□ 2.47
CDK11AQ9UQ88 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC30.45■■■□□ 2.47
CDK11AQ9UQ88 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC30.45■■■□□ 2.46
CDK11AQ9UQ88 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC30.45■■■□□ 2.46
CDK11AQ9UQ88 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CDK11AQ9UQ88 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC30.45■■■□□ 2.46
CDK11AQ9UQ88 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CDK11AQ9UQ88 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
CDK11AQ9UQ88 AC007663.1-201ENST00000438948 1240 ntBASIC30.44■■■□□ 2.46
CDK11AQ9UQ88 AC091076.1-201ENST00000610741 619 ntBASIC30.44■■■□□ 2.46
CDK11AQ9UQ88 KRT8P8-201ENST00000434750 1448 ntBASIC30.44■■■□□ 2.46
CDK11AQ9UQ88 AC092338.2-201ENST00000568827 1415 ntBASIC30.44■■■□□ 2.46
CDK11AQ9UQ88 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDK11AQ9UQ88 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
CDK11AQ9UQ88 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 GLRB-205ENST00000512619 728 ntTSL 3 BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
CDK11AQ9UQ88 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 SAPCD2P2-201ENST00000431719 1174 ntBASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 AC139887.4-201ENST00000607877 719 ntBASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
CDK11AQ9UQ88 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 COPE-203ENST00000351079 907 ntTSL 2 BASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 DERL1-203ENST00000419562 918 ntTSL 2 BASIC30.41■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms