Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 AC096631.2-201ENST00000436136 790 ntBASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 KRT16P2-201ENST00000414673 1423 ntBASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 AC005332.7-201ENST00000614046 2005 ntBASIC15.33■□□□□ 0.04
RPH3ALQ9UNE2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 TMEM179-206ENST00000616017 1645 ntBASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 AP001330.3-201ENST00000520123 633 ntBASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3ALQ9UNE2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 AC093484.2-201ENST00000580996 2166 ntBASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 AC012414.1-201ENST00000556676 535 ntBASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 AC131212.1-201ENST00000613771 668 ntBASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 MIR6084-201ENST00000622012 110 ntBASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3ALQ9UNE2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RPH3ALQ9UNE2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RPH3ALQ9UNE2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3ALQ9UNE2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RPH3ALQ9UNE2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.3■□□□□ 0.04
RPH3ALQ9UNE2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3ALQ9UNE2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3ALQ9UNE2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.3■□□□□ 0.04
RPH3ALQ9UNE2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms