Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
RIMBP3Q9UFD9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
RIMBP3Q9UFD9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
RIMBP3Q9UFD9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
RIMBP3Q9UFD9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC31.57■■■□□ 2.64
RIMBP3Q9UFD9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC31.57■■■□□ 2.64
RIMBP3Q9UFD9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
RIMBP3Q9UFD9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
RIMBP3Q9UFD9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC31.57■■■□□ 2.64
RIMBP3Q9UFD9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RIMBP3Q9UFD9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RIMBP3Q9UFD9 AC093525.10-201ENST00000625130 1569 ntBASIC31.56■■■□□ 2.64
RIMBP3Q9UFD9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
RIMBP3Q9UFD9 HLA-G-202ENST00000376815 851 ntBASIC31.56■■■□□ 2.64
RIMBP3Q9UFD9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
RIMBP3Q9UFD9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC31.56■■■□□ 2.64
RIMBP3Q9UFD9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
RIMBP3Q9UFD9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RIMBP3Q9UFD9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
RIMBP3Q9UFD9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
RIMBP3Q9UFD9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC31.55■■■□□ 2.64
RIMBP3Q9UFD9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC31.55■■■□□ 2.64
RIMBP3Q9UFD9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC31.55■■■□□ 2.64
RIMBP3Q9UFD9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
RIMBP3Q9UFD9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
RIMBP3Q9UFD9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RIMBP3Q9UFD9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
RIMBP3Q9UFD9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC31.54■■■□□ 2.64
RIMBP3Q9UFD9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RIMBP3Q9UFD9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC31.54■■■□□ 2.64
RIMBP3Q9UFD9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC31.54■■■□□ 2.64
RIMBP3Q9UFD9 FAM99A-202ENST00000538190 1989 ntBASIC31.54■■■□□ 2.64
RIMBP3Q9UFD9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RIMBP3Q9UFD9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
RIMBP3Q9UFD9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
RIMBP3Q9UFD9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 DRAXINP1-201ENST00000437611 948 ntBASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 KRT8P26-201ENST00000534154 1276 ntBASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 AC055717.3-201ENST00000622967 595 ntBASIC31.53■■■□□ 2.64
RIMBP3Q9UFD9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RIMBP3Q9UFD9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RIMBP3Q9UFD9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
RIMBP3Q9UFD9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
RIMBP3Q9UFD9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
RIMBP3Q9UFD9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC31.52■■■□□ 2.64
RIMBP3Q9UFD9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
RIMBP3Q9UFD9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC31.52■■■□□ 2.64
RIMBP3Q9UFD9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
RIMBP3Q9UFD9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RIMBP3Q9UFD9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RIMBP3Q9UFD9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC31.51■■■□□ 2.63
RIMBP3Q9UFD9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC31.51■■■□□ 2.63
RIMBP3Q9UFD9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RIMBP3Q9UFD9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
RIMBP3Q9UFD9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RIMBP3Q9UFD9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RIMBP3Q9UFD9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 MIR2861-201ENST00000636310 90 ntBASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RIMBP3Q9UFD9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 AP000867.3-201ENST00000524675 377 ntBASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 LINC00265-3P-201ENST00000447588 903 ntBASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RIMBP3Q9UFD9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms