Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.31■■□□□ 1.16
COL20A1Q9P218 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL20A1Q9P218 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL20A1Q9P218 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL20A1Q9P218 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL20A1Q9P218 UNC93B2-201ENST00000285383 730 ntBASIC22.31■■□□□ 1.16
COL20A1Q9P218 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
COL20A1Q9P218 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
COL20A1Q9P218 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.31■■□□□ 1.16
COL20A1Q9P218 MIR1238-201ENST00000408483 83 ntBASIC22.31■■□□□ 1.16
COL20A1Q9P218 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL20A1Q9P218 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.31■■□□□ 1.16
COL20A1Q9P218 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.31■■□□□ 1.16
COL20A1Q9P218 AL031985.4-201ENST00000642138 673 ntBASIC22.31■■□□□ 1.16
COL20A1Q9P218 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL20A1Q9P218 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.31■■□□□ 1.16
COL20A1Q9P218 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL20A1Q9P218 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL20A1Q9P218 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL20A1Q9P218 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.3■■□□□ 1.16
COL20A1Q9P218 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL20A1Q9P218 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL20A1Q9P218 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL20A1Q9P218 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL20A1Q9P218 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.3■■□□□ 1.16
COL20A1Q9P218 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL20A1Q9P218 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
COL20A1Q9P218 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL20A1Q9P218 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL20A1Q9P218 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL20A1Q9P218 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL20A1Q9P218 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.29■■□□□ 1.16
COL20A1Q9P218 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
COL20A1Q9P218 FAM210CP-201ENST00000445714 574 ntBASIC22.29■■□□□ 1.16
COL20A1Q9P218 B3GAT3P1-201ENST00000471720 806 ntBASIC22.29■■□□□ 1.16
COL20A1Q9P218 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL20A1Q9P218 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.29■■□□□ 1.16
COL20A1Q9P218 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.29■■□□□ 1.16
COL20A1Q9P218 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL20A1Q9P218 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL20A1Q9P218 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.29■■□□□ 1.16
COL20A1Q9P218 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.29■■□□□ 1.16
COL20A1Q9P218 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL20A1Q9P218 CYP2D8P-201ENST00000433633 1490 ntBASIC22.28■■□□□ 1.16
COL20A1Q9P218 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.28■■□□□ 1.16
COL20A1Q9P218 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL20A1Q9P218 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
COL20A1Q9P218 FITM1-202ENST00000559294 800 ntBASIC22.28■■□□□ 1.16
COL20A1Q9P218 AC026271.3-201ENST00000571884 352 ntBASIC22.28■■□□□ 1.16
COL20A1Q9P218 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL20A1Q9P218 MIR6786-201ENST00000616843 113 ntBASIC22.28■■□□□ 1.16
COL20A1Q9P218 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.28■■□□□ 1.16
COL20A1Q9P218 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL20A1Q9P218 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL20A1Q9P218 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL20A1Q9P218 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.28■■□□□ 1.16
COL20A1Q9P218 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL20A1Q9P218 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL20A1Q9P218 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.28■■□□□ 1.16
COL20A1Q9P218 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.28■■□□□ 1.16
COL20A1Q9P218 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL20A1Q9P218 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.28■■□□□ 1.16
COL20A1Q9P218 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL20A1Q9P218 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL20A1Q9P218 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL20A1Q9P218 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL20A1Q9P218 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
COL20A1Q9P218 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL20A1Q9P218 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL20A1Q9P218 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.27■■□□□ 1.16
COL20A1Q9P218 AC008040.2-201ENST00000461049 708 ntBASIC22.27■■□□□ 1.16
COL20A1Q9P218 KRT18P21-201ENST00000515767 1272 ntBASIC22.27■■□□□ 1.16
COL20A1Q9P218 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.27■■□□□ 1.16
COL20A1Q9P218 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
COL20A1Q9P218 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
COL20A1Q9P218 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
COL20A1Q9P218 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.27■■□□□ 1.16
COL20A1Q9P218 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL20A1Q9P218 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL20A1Q9P218 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL20A1Q9P218 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL20A1Q9P218 KRT8P8-201ENST00000434750 1448 ntBASIC22.26■■□□□ 1.15
COL20A1Q9P218 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL20A1Q9P218 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL20A1Q9P218 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL20A1Q9P218 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL20A1Q9P218 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL20A1Q9P218 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
COL20A1Q9P218 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms