Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 AL138781.1-201ENST00000566567 1274 ntBASIC18.82■□□□□ 0.6
BRF2Q9HAW0 AC006557.6-201ENST00000623071 864 ntBASIC18.82■□□□□ 0.6
BRF2Q9HAW0 AC133041.1-202ENST00000642053 222 ntBASIC18.82■□□□□ 0.6
BRF2Q9HAW0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRF2Q9HAW0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 AC069152.1-201ENST00000438030 544 ntBASIC18.8■□□□□ 0.6
BRF2Q9HAW0 RPS2P52-201ENST00000469610 820 ntBASIC18.8■□□□□ 0.6
BRF2Q9HAW0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 PNMA6B-201ENST00000538162 1200 ntBASIC18.8■□□□□ 0.6
BRF2Q9HAW0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 AC142086.2-201ENST00000569753 217 ntBASIC18.8■□□□□ 0.6
BRF2Q9HAW0 AC083880.1-201ENST00000608266 535 ntBASIC18.8■□□□□ 0.6
BRF2Q9HAW0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.8■□□□□ 0.6
BRF2Q9HAW0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.79■□□□□ 0.6
BRF2Q9HAW0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 AC098934.4-201ENST00000564127 592 ntBASIC18.79■□□□□ 0.6
BRF2Q9HAW0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 AL121906.2-201ENST00000621597 723 ntBASIC18.79■□□□□ 0.6
BRF2Q9HAW0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 Z82202.1-201ENST00000623446 1880 ntBASIC18.79■□□□□ 0.6
BRF2Q9HAW0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRF2Q9HAW0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.78■□□□□ 0.6
BRF2Q9HAW0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 AC104771.1-201ENST00000603335 964 ntBASIC18.78■□□□□ 0.6
BRF2Q9HAW0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms