Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 Z85996.1-201ENST00000494644 937 ntBASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 PRELID1P1-202ENST00000567272 903 ntBASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 GPALPP1-207ENST00000611650 899 ntBASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
C11orf49Q9H6J7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 AP000523.1-201ENST00000398242 1049 ntBASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 AC092119.3-201ENST00000612618 583 ntBASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 KRT16P6-202ENST00000425692 1426 ntBASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 LINC01311-201ENST00000565162 1445 ntBASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
C11orf49Q9H6J7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 AL845331.1-201ENST00000424978 1190 ntBASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 AP003041.3-201ENST00000527151 707 ntBASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 MIR3652-201ENST00000579335 131 ntBASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 NPAP1P7-201ENST00000613027 823 ntBASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf49Q9H6J7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C11orf49Q9H6J7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
C11orf49Q9H6J7 KRT8P45-201ENST00000414328 1447 ntBASIC21.66■■□□□ 1.06
C11orf49Q9H6J7 AC004870.1-201ENST00000315132 882 ntBASIC21.66■■□□□ 1.06
C11orf49Q9H6J7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
C11orf49Q9H6J7 HYMAI.1-201ENST00000620949 238 ntBASIC21.66■■□□□ 1.06
C11orf49Q9H6J7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
C11orf49Q9H6J7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C11orf49Q9H6J7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.66■■□□□ 1.06
C11orf49Q9H6J7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C11orf49Q9H6J7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.66■■□□□ 1.06
C11orf49Q9H6J7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 AC111152.3-201ENST00000569699 673 ntBASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 CR769767.2-201ENST00000622735 460 ntBASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.65■■□□□ 1.06
C11orf49Q9H6J7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.64■■□□□ 1.06
C11orf49Q9H6J7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
C11orf49Q9H6J7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
C11orf49Q9H6J7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
C11orf49Q9H6J7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
C11orf49Q9H6J7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
C11orf49Q9H6J7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.64■■□□□ 1.05
C11orf49Q9H6J7 STARP1-201ENST00000397973 869 ntBASIC21.64■■□□□ 1.05
C11orf49Q9H6J7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.64■■□□□ 1.05
C11orf49Q9H6J7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.64■■□□□ 1.05
C11orf49Q9H6J7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.64■■□□□ 1.05
C11orf49Q9H6J7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.64■■□□□ 1.05
C11orf49Q9H6J7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.64■■□□□ 1.05
C11orf49Q9H6J7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.64■■□□□ 1.05
C11orf49Q9H6J7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
C11orf49Q9H6J7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.64■■□□□ 1.05
C11orf49Q9H6J7 KRT8P10-201ENST00000450021 1447 ntBASIC21.63■■□□□ 1.05
C11orf49Q9H6J7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms