Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PRKY-204ENST00000533551 1019 ntBASIC21.69■■□□□ 1.06
RNF39Q9H2S5 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 AF230666.2-201ENST00000602328 725 ntBASIC21.69■■□□□ 1.06
RNF39Q9H2S5 CCNT2P1-201ENST00000423082 1315 ntBASIC21.69■■□□□ 1.06
RNF39Q9H2S5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 KRT8P20-201ENST00000423953 1409 ntBASIC21.69■■□□□ 1.06
RNF39Q9H2S5 KRT8P17-201ENST00000453110 1448 ntBASIC21.69■■□□□ 1.06
RNF39Q9H2S5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 AL137060.1-201ENST00000618151 2648 ntBASIC21.69■■□□□ 1.06
RNF39Q9H2S5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 XCL2-201ENST00000367819 565 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 HLA-G-202ENST00000376815 851 ntBASIC21.68■■□□□ 1.06
RNF39Q9H2S5 HLA-G-203ENST00000376818 1127 ntBASIC21.68■■□□□ 1.06
RNF39Q9H2S5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 AC120349.3-201ENST00000624377 529 ntBASIC21.68■■□□□ 1.06
RNF39Q9H2S5 AL590396.2-201ENST00000636511 1041 ntBASIC21.68■■□□□ 1.06
RNF39Q9H2S5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF39Q9H2S5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 AC090774.4-201ENST00000578888 1372 ntBASIC21.67■■□□□ 1.06
RNF39Q9H2S5 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 AC012618.2-201ENST00000428058 849 ntBASIC21.67■■□□□ 1.06
RNF39Q9H2S5 TSPY7P-201ENST00000431358 1114 ntBASIC21.67■■□□□ 1.06
RNF39Q9H2S5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 AC135178.5-201ENST00000602597 674 ntBASIC21.67■■□□□ 1.06
RNF39Q9H2S5 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF39Q9H2S5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 MTCYBP32-201ENST00000427945 1084 ntBASIC21.66■■□□□ 1.06
RNF39Q9H2S5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 AC018635.1-201ENST00000468292 1030 ntBASIC21.66■■□□□ 1.06
RNF39Q9H2S5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 AC040904.1-201ENST00000590850 223 ntBASIC21.66■■□□□ 1.06
RNF39Q9H2S5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF39Q9H2S5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 HCG24-202ENST00000414398 717 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 AP003041.2-201ENST00000525666 1180 ntBASIC21.65■■□□□ 1.06
RNF39Q9H2S5 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 AC092337.1-201ENST00000568699 1129 ntBASIC21.65■■□□□ 1.06
RNF39Q9H2S5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RNF39Q9H2S5 AL049637.2-201ENST00000641778 930 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms