Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 AL138724.1-201ENST00000606771 1088 ntBASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 AC136469.2-201ENST00000623944 1028 ntBASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 AC106820.2-201ENST00000563775 3264 ntBASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 AC141586.3-201ENST00000562166 1838 ntBASIC17.31■□□□□ 0.36
SLIRPQ9GZT3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 POU5F1P4-201ENST00000413175 1085 ntBASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 HSD17B1P1-201ENST00000590052 955 ntBASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 AC009053.2-201ENST00000563701 2365 ntBASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLIRPQ9GZT3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 ABALON-201ENST00000629058 1903 ntBASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLIRPQ9GZT3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 AP001271.2-201ENST00000624018 1556 ntBASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 AL512353.2-201ENST00000448759 1962 ntBASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLIRPQ9GZT3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms