Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 AC245052.3-201ENST00000450182 901 ntBASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 AC116050.2-201ENST00000612102 1779 ntBASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM55Q9BYV6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM55Q9BYV6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 AC073210.2-201ENST00000430369 194 ntBASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM55Q9BYV6 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.77■□□□□ 0.75
TRIM55Q9BYV6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.77■□□□□ 0.75
TRIM55Q9BYV6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
TRIM55Q9BYV6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 FAM201B-201ENST00000458407 597 ntBASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 AC013268.1-206ENST00000638368 961 ntBASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 AC112229.1-201ENST00000639295 961 ntBASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM55Q9BYV6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms