Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTFDC1Q9BY42 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTFDC1Q9BY42 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTFDC1Q9BY42 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 TSPY5P-201ENST00000426936 936 ntBASIC24■■□□□ 1.43
RTFDC1Q9BY42 FAM207BP-201ENST00000447172 505 ntBASIC24■■□□□ 1.43
RTFDC1Q9BY42 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 GPX4-207ENST00000589115 812 ntTSL 2 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 AL023803.3-201ENST00000615559 522 ntBASIC24■■□□□ 1.43
RTFDC1Q9BY42 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RTFDC1Q9BY42 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTFDC1Q9BY42 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 AC007225.1-201ENST00000566331 1836 ntBASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RTFDC1Q9BY42 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 COX11P1-201ENST00000489116 835 ntBASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 Z85996.1-201ENST00000494644 937 ntBASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
RTFDC1Q9BY42 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTFDC1Q9BY42 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.43
RTFDC1Q9BY42 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.95■■□□□ 1.43
RTFDC1Q9BY42 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 COPS8-203ENST00000409334 794 ntTSL 5 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms