Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC26.37■■□□□ 1.81
ABCA3Q99758 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA3Q99758 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC26.37■■□□□ 1.81
ABCA3Q99758 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
ABCA3Q99758 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA3Q99758 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
ABCA3Q99758 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA3Q99758 AC233723.2-201ENST00000623798 2106 ntBASIC26.37■■□□□ 1.81
ABCA3Q99758 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC26.37■■□□□ 1.81
ABCA3Q99758 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC26.37■■□□□ 1.81
ABCA3Q99758 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA3Q99758 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA3Q99758 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA3Q99758 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA3Q99758 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA3Q99758 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC26.36■■□□□ 1.81
ABCA3Q99758 NT5C-210ENST00000582160 860 ntTSL 2 BASIC26.36■■□□□ 1.81
ABCA3Q99758 NDUFV2-AS1-203ENST00000608008 779 ntBASIC26.36■■□□□ 1.81
ABCA3Q99758 DFFB-212ENST00000625756 649 ntTSL 5 BASIC26.36■■□□□ 1.81
ABCA3Q99758 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA3Q99758 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.36■■□□□ 1.81
ABCA3Q99758 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA3Q99758 AL136038.3-201ENST00000561909 1096 ntBASIC26.36■■□□□ 1.81
ABCA3Q99758 AL512604.3-201ENST00000569583 964 ntBASIC26.36■■□□□ 1.81
ABCA3Q99758 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC26.36■■□□□ 1.81
ABCA3Q99758 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA3Q99758 AL691432.3-201ENST00000621860 400 ntBASIC26.36■■□□□ 1.81
ABCA3Q99758 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA3Q99758 TMEM179-206ENST00000616017 1645 ntBASIC26.35■■□□□ 1.81
ABCA3Q99758 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCA3Q99758 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
ABCA3Q99758 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCA3Q99758 STARP1-201ENST00000397973 869 ntBASIC26.35■■□□□ 1.81
ABCA3Q99758 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ABCA3Q99758 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC26.35■■□□□ 1.81
ABCA3Q99758 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ABCA3Q99758 AC023511.2-201ENST00000618803 211 ntBASIC26.35■■□□□ 1.81
ABCA3Q99758 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCA3Q99758 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ABCA3Q99758 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC26.34■■□□□ 1.81
ABCA3Q99758 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
ABCA3Q99758 AC121338.2-201ENST00000622535 1744 ntBASIC26.34■■□□□ 1.81
ABCA3Q99758 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC26.34■■□□□ 1.81
ABCA3Q99758 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA3Q99758 KRT8P45-201ENST00000414328 1447 ntBASIC26.34■■□□□ 1.81
ABCA3Q99758 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA3Q99758 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA3Q99758 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA3Q99758 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC26.34■■□□□ 1.81
ABCA3Q99758 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC26.34■■□□□ 1.81
ABCA3Q99758 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC26.34■■□□□ 1.81
ABCA3Q99758 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA3Q99758 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA3Q99758 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA3Q99758 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA3Q99758 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA3Q99758 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA3Q99758 LY6E-213ENST00000522528 606 ntTSL 3 BASIC26.34■■□□□ 1.81
ABCA3Q99758 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC26.34■■□□□ 1.81
ABCA3Q99758 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC26.34■■□□□ 1.81
ABCA3Q99758 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA3Q99758 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA3Q99758 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA3Q99758 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA3Q99758 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
ABCA3Q99758 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA3Q99758 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA3Q99758 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC26.33■■□□□ 1.81
ABCA3Q99758 SNX5-210ENST00000481323 562 ntTSL 3 BASIC26.33■■□□□ 1.81
ABCA3Q99758 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
ABCA3Q99758 PRR29-207ENST00000580752 458 ntTSL 3 BASIC26.33■■□□□ 1.81
ABCA3Q99758 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC26.33■■□□□ 1.81
ABCA3Q99758 KRT8P8-201ENST00000434750 1448 ntBASIC26.33■■□□□ 1.81
ABCA3Q99758 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
ABCA3Q99758 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
ABCA3Q99758 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC26.33■■□□□ 1.8
ABCA3Q99758 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA3Q99758 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA3Q99758 KRT8P10-201ENST00000450021 1447 ntBASIC26.32■■□□□ 1.8
ABCA3Q99758 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA3Q99758 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA3Q99758 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC26.32■■□□□ 1.8
ABCA3Q99758 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC26.32■■□□□ 1.8
ABCA3Q99758 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
ABCA3Q99758 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
ABCA3Q99758 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA3Q99758 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
ABCA3Q99758 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC26.32■■□□□ 1.8
ABCA3Q99758 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
ABCA3Q99758 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA3Q99758 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC26.32■■□□□ 1.8
ABCA3Q99758 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA3Q99758 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA3Q99758 PRSS44-201ENST00000515154 1146 ntBASIC26.31■■□□□ 1.8
ABCA3Q99758 NEK4P2-201ENST00000580004 1012 ntBASIC26.31■■□□□ 1.8
ABCA3Q99758 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC26.31■■□□□ 1.8
ABCA3Q99758 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC26.31■■□□□ 1.8
ABCA3Q99758 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA3Q99758 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
ABCA3Q99758 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms