Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 BX664615.1-201ENST00000443558 458 ntBASIC19.25■□□□□ 0.67
PCDH15Q96QU1 KRT18P56-201ENST00000507275 550 ntBASIC19.25■□□□□ 0.67
PCDH15Q96QU1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 AC139887.4-201ENST00000607877 719 ntBASIC19.25■□□□□ 0.67
PCDH15Q96QU1 AC116407.4-201ENST00000623319 1061 ntBASIC19.25■□□□□ 0.67
PCDH15Q96QU1 HLA-A-209ENST00000638375 975 ntBASIC19.25■□□□□ 0.67
PCDH15Q96QU1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 RNF152P1-201ENST00000397754 604 ntBASIC19.24■□□□□ 0.67
PCDH15Q96QU1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 FAM207BP-201ENST00000447172 505 ntBASIC19.24■□□□□ 0.67
PCDH15Q96QU1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 AC010653.2-201ENST00000623505 997 ntBASIC19.24■□□□□ 0.67
PCDH15Q96QU1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 AC004951.3-201ENST00000418645 1148 ntBASIC19.24■□□□□ 0.67
PCDH15Q96QU1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 AL359075.1-203ENST00000462729 1002 ntBASIC19.24■□□□□ 0.67
PCDH15Q96QU1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PCDH15Q96QU1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.23■□□□□ 0.67
PCDH15Q96QU1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 KRT18P48-201ENST00000434763 852 ntBASIC19.23■□□□□ 0.67
PCDH15Q96QU1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
PCDH15Q96QU1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 CCR12P-201ENST00000446203 998 ntBASIC19.22■□□□□ 0.67
PCDH15Q96QU1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 AC083849.1-201ENST00000615227 514 ntBASIC19.22■□□□□ 0.67
PCDH15Q96QU1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 AC007375.3-201ENST00000600936 2314 ntBASIC19.22■□□□□ 0.67
PCDH15Q96QU1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH15Q96QU1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH15Q96QU1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH15Q96QU1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH15Q96QU1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH15Q96QU1 AC007225.1-201ENST00000566331 1836 ntBASIC19.21■□□□□ 0.67
PCDH15Q96QU1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH15Q96QU1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH15Q96QU1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH15Q96QU1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH15Q96QU1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH15Q96QU1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms