Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.66■□□□□ 0.42
PTP4A1Q93096 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PTP4A1Q93096 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.66■□□□□ 0.42
PTP4A1Q93096 AC008694.1-202ENST00000636953 945 ntBASIC17.66■□□□□ 0.42
PTP4A1Q93096 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.66■□□□□ 0.42
PTP4A1Q93096 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.66■□□□□ 0.42
PTP4A1Q93096 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTP4A1Q93096 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTP4A1Q93096 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTP4A1Q93096 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.66■□□□□ 0.42
PTP4A1Q93096 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTP4A1Q93096 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTP4A1Q93096 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.65■□□□□ 0.42
PTP4A1Q93096 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.65■□□□□ 0.42
PTP4A1Q93096 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.65■□□□□ 0.42
PTP4A1Q93096 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.65■□□□□ 0.42
PTP4A1Q93096 AC093503.3-201ENST00000624917 2352 ntBASIC17.65■□□□□ 0.42
PTP4A1Q93096 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.65■□□□□ 0.42
PTP4A1Q93096 AC069236.1-201ENST00000604339 616 ntBASIC17.65■□□□□ 0.42
PTP4A1Q93096 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.65■□□□□ 0.42
PTP4A1Q93096 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.65■□□□□ 0.42
PTP4A1Q93096 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.65■□□□□ 0.42
PTP4A1Q93096 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTP4A1Q93096 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.64■□□□□ 0.42
PTP4A1Q93096 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTP4A1Q93096 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTP4A1Q93096 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTP4A1Q93096 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTP4A1Q93096 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PTP4A1Q93096 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PTP4A1Q93096 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.64■□□□□ 0.41
PTP4A1Q93096 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PTP4A1Q93096 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTP4A1Q93096 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.64■□□□□ 0.41
PTP4A1Q93096 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.64■□□□□ 0.41
PTP4A1Q93096 AC005181.1-201ENST00000604782 1256 ntBASIC17.64■□□□□ 0.41
PTP4A1Q93096 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.64■□□□□ 0.41
PTP4A1Q93096 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTP4A1Q93096 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.64■□□□□ 0.41
PTP4A1Q93096 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTP4A1Q93096 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTP4A1Q93096 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTP4A1Q93096 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.64■□□□□ 0.41
PTP4A1Q93096 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.64■□□□□ 0.41
PTP4A1Q93096 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 AC023632.3-201ENST00000521633 145 ntBASIC17.63■□□□□ 0.41
PTP4A1Q93096 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 OR10C1-204ENST00000622521 1039 ntBASIC17.63■□□□□ 0.41
PTP4A1Q93096 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTP4A1Q93096 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PTP4A1Q93096 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTP4A1Q93096 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTP4A1Q93096 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.62■□□□□ 0.41
PTP4A1Q93096 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTP4A1Q93096 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTP4A1Q93096 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTP4A1Q93096 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTP4A1Q93096 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTP4A1Q93096 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTP4A1Q93096 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTP4A1Q93096 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTP4A1Q93096 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms