Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA4DQ92854 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.18■□□□□ 0.98
SEMA4DQ92854 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA4DQ92854 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA4DQ92854 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA4DQ92854 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA4DQ92854 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.18■□□□□ 0.98
SEMA4DQ92854 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA4DQ92854 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.18■□□□□ 0.98
SEMA4DQ92854 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA4DQ92854 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SEMA4DQ92854 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA4DQ92854 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SEMA4DQ92854 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SEMA4DQ92854 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA4DQ92854 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA4DQ92854 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA4DQ92854 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA4DQ92854 AC069544.1-201ENST00000609399 999 ntBASIC21.17■□□□□ 0.98
SEMA4DQ92854 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.17■□□□□ 0.98
SEMA4DQ92854 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA4DQ92854 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SEMA4DQ92854 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA4DQ92854 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SEMA4DQ92854 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.17■□□□□ 0.98
SEMA4DQ92854 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA4DQ92854 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA4DQ92854 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA4DQ92854 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.17■□□□□ 0.98
SEMA4DQ92854 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA4DQ92854 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA4DQ92854 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SEMA4DQ92854 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.16■□□□□ 0.98
SEMA4DQ92854 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.16■□□□□ 0.98
SEMA4DQ92854 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.16■□□□□ 0.98
SEMA4DQ92854 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA4DQ92854 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA4DQ92854 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.16■□□□□ 0.98
SEMA4DQ92854 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA4DQ92854 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA4DQ92854 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.16■□□□□ 0.98
SEMA4DQ92854 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.16■□□□□ 0.98
SEMA4DQ92854 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.16■□□□□ 0.98
SEMA4DQ92854 MTDHP1-201ENST00000605323 784 ntBASIC21.16■□□□□ 0.98
SEMA4DQ92854 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA4DQ92854 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA4DQ92854 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA4DQ92854 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SEMA4DQ92854 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA4DQ92854 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.15■□□□□ 0.98
SEMA4DQ92854 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA4DQ92854 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SEMA4DQ92854 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA4DQ92854 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA4DQ92854 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA4DQ92854 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA4DQ92854 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
SEMA4DQ92854 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.15■□□□□ 0.98
SEMA4DQ92854 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.15■□□□□ 0.98
SEMA4DQ92854 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA4DQ92854 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SEMA4DQ92854 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.14■□□□□ 0.98
SEMA4DQ92854 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SEMA4DQ92854 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.14■□□□□ 0.98
SEMA4DQ92854 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SEMA4DQ92854 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SEMA4DQ92854 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 KRT17P3-201ENST00000420566 1262 ntBASIC21.14■□□□□ 0.97
SEMA4DQ92854 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA4DQ92854 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA4DQ92854 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA4DQ92854 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA4DQ92854 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.14■□□□□ 0.97
SEMA4DQ92854 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA4DQ92854 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA4DQ92854 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 AP006587.1-201ENST00000534129 1502 ntBASIC21.14■□□□□ 0.97
SEMA4DQ92854 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA4DQ92854 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.14■□□□□ 0.97
SEMA4DQ92854 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.13■□□□□ 0.97
SEMA4DQ92854 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA4DQ92854 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA4DQ92854 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA4DQ92854 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA4DQ92854 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.13■□□□□ 0.97
SEMA4DQ92854 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
SEMA4DQ92854 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.13■□□□□ 0.97
SEMA4DQ92854 POU5F1P3-201ENST00000428824 1078 ntBASIC21.13■□□□□ 0.97
SEMA4DQ92854 TSPY20P-201ENST00000450910 630 ntBASIC21.13■□□□□ 0.97
SEMA4DQ92854 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SEMA4DQ92854 AC073648.6-201ENST00000641589 218 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms