Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 KRT18P21-201ENST00000515767 1272 ntBASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 C1QL1P1-201ENST00000568105 661 ntBASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 AC012306.2-201ENST00000609350 630 ntBASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 PHGDH-210ENST00000641115 1638 ntBASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 YBX1P10-201ENST00000444752 975 ntBASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 AC079598.2-202ENST00000546624 1451 ntBASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 AP005212.1-201ENST00000581547 1997 ntBASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3RF2Q8TEC5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 UNC93B2-201ENST00000285383 730 ntBASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 AP000525.1-201ENST00000608286 694 ntBASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.42■□□□□ 0.86
SH3RF2Q8TEC5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 KRT18P16-201ENST00000510337 1294 ntBASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3RF2Q8TEC5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 LINC01521-201ENST00000504184 1943 ntBASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 AC116562.2-201ENST00000507042 360 ntBASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms