Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC003102.1-202ENST00000563394 1796 ntBASIC19.43■□□□□ 0.7
APLFQ8IW19 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 AC128676.1-201ENST00000454392 318 ntBASIC19.43■□□□□ 0.7
APLFQ8IW19 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 AC026366.1-201ENST00000488803 879 ntBASIC19.43■□□□□ 0.7
APLFQ8IW19 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.43■□□□□ 0.7
APLFQ8IW19 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.43■□□□□ 0.7
APLFQ8IW19 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
APLFQ8IW19 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
APLFQ8IW19 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.42■□□□□ 0.7
APLFQ8IW19 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
APLFQ8IW19 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
APLFQ8IW19 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
APLFQ8IW19 AC061975.6-201ENST00000579045 1553 ntBASIC19.42■□□□□ 0.7
APLFQ8IW19 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APLFQ8IW19 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.42■□□□□ 0.7
APLFQ8IW19 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APLFQ8IW19 LSM12P1-201ENST00000411836 588 ntBASIC19.42■□□□□ 0.7
APLFQ8IW19 UNC93B5-201ENST00000530315 699 ntBASIC19.42■□□□□ 0.7
APLFQ8IW19 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
APLFQ8IW19 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.42■□□□□ 0.7
APLFQ8IW19 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
APLFQ8IW19 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.42■□□□□ 0.7
APLFQ8IW19 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APLFQ8IW19 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.42■□□□□ 0.7
APLFQ8IW19 AC099778.1-201ENST00000568593 1911 ntBASIC19.42■□□□□ 0.7
APLFQ8IW19 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APLFQ8IW19 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APLFQ8IW19 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.42■□□□□ 0.7
APLFQ8IW19 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
APLFQ8IW19 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
APLFQ8IW19 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APLFQ8IW19 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
APLFQ8IW19 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APLFQ8IW19 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APLFQ8IW19 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APLFQ8IW19 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.41■□□□□ 0.7
APLFQ8IW19 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.41■□□□□ 0.7
APLFQ8IW19 AC142381.4-202ENST00000563973 229 ntBASIC19.41■□□□□ 0.7
APLFQ8IW19 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APLFQ8IW19 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APLFQ8IW19 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APLFQ8IW19 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APLFQ8IW19 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.4■□□□□ 0.7
APLFQ8IW19 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APLFQ8IW19 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.4■□□□□ 0.7
APLFQ8IW19 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.4■□□□□ 0.7
APLFQ8IW19 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.4■□□□□ 0.7
APLFQ8IW19 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APLFQ8IW19 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APLFQ8IW19 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APLFQ8IW19 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.4■□□□□ 0.7
APLFQ8IW19 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.4■□□□□ 0.7
APLFQ8IW19 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.4■□□□□ 0.7
APLFQ8IW19 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.4■□□□□ 0.7
APLFQ8IW19 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.4■□□□□ 0.7
APLFQ8IW19 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.4■□□□□ 0.7
APLFQ8IW19 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APLFQ8IW19 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APLFQ8IW19 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APLFQ8IW19 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.4■□□□□ 0.7
APLFQ8IW19 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
APLFQ8IW19 AL049812.1-201ENST00000432563 2267 ntBASIC19.4■□□□□ 0.7
APLFQ8IW19 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
APLFQ8IW19 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
APLFQ8IW19 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
APLFQ8IW19 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
APLFQ8IW19 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
APLFQ8IW19 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
APLFQ8IW19 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
APLFQ8IW19 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APLFQ8IW19 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APLFQ8IW19 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
APLFQ8IW19 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.39■□□□□ 0.69
APLFQ8IW19 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
APLFQ8IW19 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APLFQ8IW19 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
APLFQ8IW19 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
APLFQ8IW19 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.39■□□□□ 0.69
APLFQ8IW19 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APLFQ8IW19 AP003097.1-201ENST00000530657 1135 ntBASIC19.39■□□□□ 0.69
APLFQ8IW19 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.39■□□□□ 0.69
APLFQ8IW19 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.39■□□□□ 0.69
APLFQ8IW19 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.39■□□□□ 0.69
APLFQ8IW19 FAM21FP-204ENST00000608637 956 ntBASIC19.39■□□□□ 0.69
APLFQ8IW19 AC100791.3-201ENST00000617619 330 ntBASIC19.39■□□□□ 0.69
APLFQ8IW19 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APLFQ8IW19 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
APLFQ8IW19 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APLFQ8IW19 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APLFQ8IW19 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.39■□□□□ 0.69
APLFQ8IW19 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APLFQ8IW19 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms