Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC28Q86X40 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC28Q86X40 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LRRC28Q86X40 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRC28Q86X40 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC28Q86X40 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC28Q86X40 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC28Q86X40 HLA-L-209ENST00000420110 1011 ntBASIC17.46■□□□□ 0.39
LRRC28Q86X40 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC28Q86X40 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
LRRC28Q86X40 AL121832.2-201ENST00000610979 668 ntBASIC17.46■□□□□ 0.39
LRRC28Q86X40 AL050303.2-201ENST00000619798 666 ntBASIC17.46■□□□□ 0.39
LRRC28Q86X40 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC28Q86X40 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LRRC28Q86X40 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC28Q86X40 AL138781.2-201ENST00000617896 1843 ntBASIC17.46■□□□□ 0.39
LRRC28Q86X40 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC28Q86X40 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC28Q86X40 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC28Q86X40 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRC28Q86X40 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC28Q86X40 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
LRRC28Q86X40 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LRRC28Q86X40 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LRRC28Q86X40 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.46■□□□□ 0.38
LRRC28Q86X40 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.46■□□□□ 0.38
LRRC28Q86X40 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC28Q86X40 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC28Q86X40 BX119927.1-201ENST00000636596 1552 ntBASIC17.45■□□□□ 0.38
LRRC28Q86X40 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC28Q86X40 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRRC28Q86X40 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC28Q86X40 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.45■□□□□ 0.38
LRRC28Q86X40 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC28Q86X40 AC245052.3-201ENST00000450182 901 ntBASIC17.45■□□□□ 0.38
LRRC28Q86X40 AC083906.2-201ENST00000511578 360 ntBASIC17.45■□□□□ 0.38
LRRC28Q86X40 AL162412.1-201ENST00000567129 965 ntBASIC17.45■□□□□ 0.38
LRRC28Q86X40 AC133552.2-202ENST00000575694 574 ntBASIC17.45■□□□□ 0.38
LRRC28Q86X40 AL591742.1-201ENST00000604433 565 ntBASIC17.45■□□□□ 0.38
LRRC28Q86X40 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC28Q86X40 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC28Q86X40 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
LRRC28Q86X40 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC28Q86X40 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC28Q86X40 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRRC28Q86X40 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC28Q86X40 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC28Q86X40 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC28Q86X40 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC28Q86X40 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.44■□□□□ 0.38
LRRC28Q86X40 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.44■□□□□ 0.38
LRRC28Q86X40 AL109923.1-201ENST00000618799 583 ntBASIC17.44■□□□□ 0.38
LRRC28Q86X40 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC28Q86X40 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRRC28Q86X40 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.44■□□□□ 0.38
LRRC28Q86X40 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC28Q86X40 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LRRC28Q86X40 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC28Q86X40 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRC28Q86X40 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC28Q86X40 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC28Q86X40 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC28Q86X40 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LRRC28Q86X40 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC28Q86X40 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC28Q86X40 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
LRRC28Q86X40 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC28Q86X40 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.43■□□□□ 0.38
LRRC28Q86X40 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms