Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 KRT8P17-201ENST00000453110 1448 ntBASIC20.27■□□□□ 0.84
CCDC25Q86WR0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 KRT19P1-201ENST00000405746 1186 ntBASIC20.27■□□□□ 0.84
CCDC25Q86WR0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 MYCNOS-205ENST00000641950 531 ntBASIC20.27■□□□□ 0.84
CCDC25Q86WR0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC25Q86WR0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.27■□□□□ 0.83
CCDC25Q86WR0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC25Q86WR0 KRT16P6-202ENST00000425692 1426 ntBASIC20.27■□□□□ 0.83
CCDC25Q86WR0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC25Q86WR0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CCDC25Q86WR0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 NEFHP1-201ENST00000412845 2629 ntBASIC20.25■□□□□ 0.83
CCDC25Q86WR0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 AL591742.1-201ENST00000604433 565 ntBASIC20.25■□□□□ 0.83
CCDC25Q86WR0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC25Q86WR0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms