Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 AP000523.1-201ENST00000398242 1049 ntBASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 AC092329.2-201ENST00000598402 547 ntBASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 AC018553.1-201ENST00000616682 1458 ntBASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCRAQ6ISU1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 CA15P1-201ENST00000481698 905 ntBASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCRAQ6ISU1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 STARP1-201ENST00000397973 869 ntBASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 AP003041.3-201ENST00000527151 707 ntBASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.34■□□□□ 0.85
PTCRAQ6ISU1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCRAQ6ISU1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PTCRAQ6ISU1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCRAQ6ISU1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCRAQ6ISU1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PTCRAQ6ISU1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.33■□□□□ 0.85
PTCRAQ6ISU1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCRAQ6ISU1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.33■□□□□ 0.85
PTCRAQ6ISU1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.33■□□□□ 0.85
PTCRAQ6ISU1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PTCRAQ6ISU1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PTCRAQ6ISU1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.33■□□□□ 0.84
PTCRAQ6ISU1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.33■□□□□ 0.84
PTCRAQ6ISU1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 AL022342.1-201ENST00000400363 863 ntBASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 Z85996.1-201ENST00000494644 937 ntBASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 UNC93B7-201ENST00000509439 705 ntBASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms