Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 LINC01238-205ENST00000567549 1107 ntBASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 COPS8-203ENST00000409334 794 ntTSL 5 BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 DERL1-203ENST00000419562 918 ntTSL 2 BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDC42BPAQ5VT25 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CDC42BPAQ5VT25 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
CDC42BPAQ5VT25 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC29.92■■■□□ 2.38
CDC42BPAQ5VT25 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CDC42BPAQ5VT25 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC29.92■■■□□ 2.38
CDC42BPAQ5VT25 CD70-202ENST00000423145 881 ntTSL 2 BASIC29.92■■■□□ 2.38
CDC42BPAQ5VT25 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
CDC42BPAQ5VT25 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CDC42BPAQ5VT25 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CDC42BPAQ5VT25 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 SMG8-203ENST00000578922 2178 ntBASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 AC139887.4-201ENST00000607877 719 ntBASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 AL023803.3-201ENST00000615559 522 ntBASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 AC008622.2-201ENST00000617006 1229 ntBASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 AP001271.2-201ENST00000624018 1556 ntBASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 SLC25A1P2-201ENST00000430693 912 ntBASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 AC092338.2-201ENST00000568827 1415 ntBASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 AC141257.4-201ENST00000634557 245 ntBASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 AC136944.6-201ENST00000634818 245 ntBASIC29.91■■■□□ 2.38
CDC42BPAQ5VT25 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDC42BPAQ5VT25 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDC42BPAQ5VT25 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC29.9■■■□□ 2.38
CDC42BPAQ5VT25 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDC42BPAQ5VT25 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC29.9■■■□□ 2.38
CDC42BPAQ5VT25 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDC42BPAQ5VT25 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDC42BPAQ5VT25 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDC42BPAQ5VT25 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 AC116562.4-202ENST00000641738 218 ntBASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
CDC42BPAQ5VT25 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
CDC42BPAQ5VT25 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 FEM1AP1-201ENST00000431297 1995 ntBASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms