Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 AC148477.8-201ENST00000624298 468 ntBASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.31■■□□□ 1.16
COL13A1Q5TAT6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 DNAJB3-202ENST00000449667 1266 ntBASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
COL13A1Q5TAT6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 AC093909.1-201ENST00000504731 1122 ntBASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL13A1Q5TAT6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 AC068473.5-201ENST00000616428 2072 ntBASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 METTL21AP1-201ENST00000438852 635 ntBASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 AC245100.3-201ENST00000441281 285 ntBASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 CA15P1-201ENST00000481698 905 ntBASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 MIR3687-2-201ENST00000577708 61 ntBASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 MIR3687-1-201ENST00000614492 61 ntBASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 MIR1199-201ENST00000621445 119 ntBASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.28■■□□□ 1.16
COL13A1Q5TAT6 AP006587.1-201ENST00000534129 1502 ntBASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 MED22-202ENST00000371999 987 ntTSL 3 BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 REXO1L6P-202ENST00000619970 1078 ntBASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL13A1Q5TAT6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.27■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms