Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN20Q4JDL3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN20Q4JDL3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PTPN20Q4JDL3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 AP006587.1-201ENST00000534129 1502 ntBASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN20Q4JDL3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 KRT17P3-201ENST00000420566 1262 ntBASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 MTDHP1-201ENST00000605323 784 ntBASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms