Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
USH1GQ495M9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
USH1GQ495M9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
USH1GQ495M9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
USH1GQ495M9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
USH1GQ495M9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.62■■□□□ 1.21
USH1GQ495M9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
USH1GQ495M9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
USH1GQ495M9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.61■■□□□ 1.21
USH1GQ495M9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.61■■□□□ 1.21
USH1GQ495M9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
USH1GQ495M9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.61■■□□□ 1.21
USH1GQ495M9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
USH1GQ495M9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
USH1GQ495M9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
USH1GQ495M9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
USH1GQ495M9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
USH1GQ495M9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.61■■□□□ 1.21
USH1GQ495M9 TUBB8P6-201ENST00000436895 1288 ntBASIC22.61■■□□□ 1.21
USH1GQ495M9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
USH1GQ495M9 KRT18P16-201ENST00000510337 1294 ntBASIC22.61■■□□□ 1.21
USH1GQ495M9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.61■■□□□ 1.21
USH1GQ495M9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
USH1GQ495M9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
USH1GQ495M9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.61■■□□□ 1.21
USH1GQ495M9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.61■■□□□ 1.21
USH1GQ495M9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
USH1GQ495M9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
USH1GQ495M9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
USH1GQ495M9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
USH1GQ495M9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
USH1GQ495M9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
USH1GQ495M9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.6■■□□□ 1.21
USH1GQ495M9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
USH1GQ495M9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
USH1GQ495M9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.6■■□□□ 1.21
USH1GQ495M9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
USH1GQ495M9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
USH1GQ495M9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.6■■□□□ 1.21
USH1GQ495M9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.6■■□□□ 1.21
USH1GQ495M9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.6■■□□□ 1.21
USH1GQ495M9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.6■■□□□ 1.21
USH1GQ495M9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
USH1GQ495M9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
USH1GQ495M9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.6■■□□□ 1.21
USH1GQ495M9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
USH1GQ495M9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
USH1GQ495M9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.6■■□□□ 1.21
USH1GQ495M9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USH1GQ495M9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.59■■□□□ 1.21
USH1GQ495M9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USH1GQ495M9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
USH1GQ495M9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USH1GQ495M9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USH1GQ495M9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USH1GQ495M9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
USH1GQ495M9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
USH1GQ495M9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
USH1GQ495M9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.59■■□□□ 1.21
USH1GQ495M9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.59■■□□□ 1.21
USH1GQ495M9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.59■■□□□ 1.21
USH1GQ495M9 REXO1L12P-201ENST00000622156 912 ntBASIC22.59■■□□□ 1.21
USH1GQ495M9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.59■■□□□ 1.21
USH1GQ495M9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USH1GQ495M9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
USH1GQ495M9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
USH1GQ495M9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
USH1GQ495M9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USH1GQ495M9 AC099778.1-201ENST00000568593 1911 ntBASIC22.59■■□□□ 1.21
USH1GQ495M9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.58■■□□□ 1.21
USH1GQ495M9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.58■■□□□ 1.21
USH1GQ495M9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
USH1GQ495M9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
USH1GQ495M9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USH1GQ495M9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USH1GQ495M9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USH1GQ495M9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USH1GQ495M9 KSR1P1-201ENST00000446298 240 ntBASIC22.58■■□□□ 1.21
USH1GQ495M9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
USH1GQ495M9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USH1GQ495M9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
USH1GQ495M9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.58■■□□□ 1.21
USH1GQ495M9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.58■■□□□ 1.21
USH1GQ495M9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
USH1GQ495M9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.58■■□□□ 1.21
USH1GQ495M9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
USH1GQ495M9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
USH1GQ495M9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USH1GQ495M9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
USH1GQ495M9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.58■■□□□ 1.2
USH1GQ495M9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
USH1GQ495M9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.58■■□□□ 1.2
USH1GQ495M9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.57■■□□□ 1.2
USH1GQ495M9 KRT16P1-201ENST00000399124 1418 ntBASIC22.57■■□□□ 1.2
USH1GQ495M9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.57■■□□□ 1.2
USH1GQ495M9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USH1GQ495M9 TMEM179-206ENST00000616017 1645 ntBASIC22.57■■□□□ 1.2
USH1GQ495M9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
USH1GQ495M9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
USH1GQ495M9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms