Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC110285.5-201ENST00000611501 352 ntBASIC18.53■□□□□ 0.56
RAB38P57729 AL359736.2-201ENST00000621992 437 ntBASIC18.53■□□□□ 0.56
RAB38P57729 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB38P57729 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.53■□□□□ 0.56
RAB38P57729 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB38P57729 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB38P57729 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB38P57729 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB38P57729 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB38P57729 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAB38P57729 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB38P57729 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB38P57729 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB38P57729 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.52■□□□□ 0.56
RAB38P57729 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB38P57729 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB38P57729 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RAB38P57729 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.52■□□□□ 0.56
RAB38P57729 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB38P57729 AC098590.1-201ENST00000468126 897 ntBASIC18.52■□□□□ 0.56
RAB38P57729 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB38P57729 AC142381.4-202ENST00000563973 229 ntBASIC18.52■□□□□ 0.56
RAB38P57729 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.52■□□□□ 0.56
RAB38P57729 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB38P57729 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAB38P57729 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB38P57729 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB38P57729 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB38P57729 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
RAB38P57729 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB38P57729 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB38P57729 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB38P57729 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB38P57729 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB38P57729 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB38P57729 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB38P57729 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB38P57729 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB38P57729 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB38P57729 AC004264.1-201ENST00000608354 794 ntBASIC18.51■□□□□ 0.55
RAB38P57729 FAM197Y4-202ENST00000622692 608 ntBASIC18.51■□□□□ 0.55
RAB38P57729 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB38P57729 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.51■□□□□ 0.55
RAB38P57729 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RAB38P57729 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB38P57729 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB38P57729 PCDHAC2-203ENST00000615316 3011 ntBASIC18.51■□□□□ 0.55
RAB38P57729 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RAB38P57729 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB38P57729 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RAB38P57729 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB38P57729 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB38P57729 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB38P57729 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB38P57729 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB38P57729 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB38P57729 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RAB38P57729 GCSHP5-201ENST00000443090 522 ntBASIC18.5■□□□□ 0.55
RAB38P57729 KRT18P16-201ENST00000510337 1294 ntBASIC18.5■□□□□ 0.55
RAB38P57729 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.5■□□□□ 0.55
RAB38P57729 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.5■□□□□ 0.55
RAB38P57729 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB38P57729 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB38P57729 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB38P57729 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB38P57729 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB38P57729 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB38P57729 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RAB38P57729 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAB38P57729 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAB38P57729 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB38P57729 TUBB8P6-201ENST00000436895 1288 ntBASIC18.49■□□□□ 0.55
RAB38P57729 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAB38P57729 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB38P57729 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB38P57729 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.49■□□□□ 0.55
RAB38P57729 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RAB38P57729 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB38P57729 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB38P57729 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RAB38P57729 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms