Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PEX3P56589 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PEX3P56589 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PEX3P56589 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PEX3P56589 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.71■■□□□ 1.07
PEX3P56589 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PEX3P56589 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.71■■□□□ 1.07
PEX3P56589 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.71■■□□□ 1.07
PEX3P56589 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.71■■□□□ 1.07
PEX3P56589 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.71■■□□□ 1.07
PEX3P56589 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.71■■□□□ 1.07
PEX3P56589 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.71■■□□□ 1.07
PEX3P56589 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.71■■□□□ 1.07
PEX3P56589 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.71■■□□□ 1.07
PEX3P56589 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX3P56589 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PEX3P56589 TMEM179-206ENST00000616017 1645 ntBASIC21.7■■□□□ 1.06
PEX3P56589 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.7■■□□□ 1.06
PEX3P56589 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEX3P56589 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.7■■□□□ 1.06
PEX3P56589 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PEX3P56589 UBE2SP1-201ENST00000450587 669 ntBASIC21.7■■□□□ 1.06
PEX3P56589 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PEX3P56589 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.7■■□□□ 1.06
PEX3P56589 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEX3P56589 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.7■■□□□ 1.06
PEX3P56589 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.7■■□□□ 1.06
PEX3P56589 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.7■■□□□ 1.06
PEX3P56589 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.7■■□□□ 1.06
PEX3P56589 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.7■■□□□ 1.06
PEX3P56589 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PEX3P56589 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PEX3P56589 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PEX3P56589 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEX3P56589 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEX3P56589 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEX3P56589 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PEX3P56589 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PEX3P56589 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.7■■□□□ 1.06
PEX3P56589 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PEX3P56589 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PEX3P56589 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PEX3P56589 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.69■■□□□ 1.06
PEX3P56589 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.69■■□□□ 1.06
PEX3P56589 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.69■■□□□ 1.06
PEX3P56589 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.69■■□□□ 1.06
PEX3P56589 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PEX3P56589 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PEX3P56589 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PEX3P56589 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PEX3P56589 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.69■■□□□ 1.06
PEX3P56589 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.69■■□□□ 1.06
PEX3P56589 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PEX3P56589 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.69■■□□□ 1.06
PEX3P56589 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.68■■□□□ 1.06
PEX3P56589 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PEX3P56589 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PEX3P56589 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.68■■□□□ 1.06
PEX3P56589 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PEX3P56589 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PEX3P56589 YBX1P10-201ENST00000444752 975 ntBASIC21.68■■□□□ 1.06
PEX3P56589 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PEX3P56589 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.68■■□□□ 1.06
PEX3P56589 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
PEX3P56589 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.68■■□□□ 1.06
PEX3P56589 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PEX3P56589 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PEX3P56589 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PEX3P56589 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PEX3P56589 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PEX3P56589 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PEX3P56589 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.68■■□□□ 1.06
PEX3P56589 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PEX3P56589 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PEX3P56589 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PEX3P56589 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PEX3P56589 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PEX3P56589 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.67■■□□□ 1.06
PEX3P56589 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PEX3P56589 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.67■■□□□ 1.06
PEX3P56589 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PEX3P56589 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PEX3P56589 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
PEX3P56589 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PEX3P56589 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PEX3P56589 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PEX3P56589 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PEX3P56589 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.67■■□□□ 1.06
PEX3P56589 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms