Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH13P55290 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH13P55290 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CDH13P55290 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDH13P55290 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH13P55290 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH13P55290 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH13P55290 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH13P55290 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.22■□□□□ 0.67
CDH13P55290 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH13P55290 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH13P55290 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.22■□□□□ 0.67
CDH13P55290 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH13P55290 AC073111.5-205ENST00000641717 521 ntBASIC19.22■□□□□ 0.67
CDH13P55290 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH13P55290 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDH13P55290 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH13P55290 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDH13P55290 AL032819.2-201ENST00000624543 2162 ntBASIC19.22■□□□□ 0.67
CDH13P55290 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.22■□□□□ 0.67
CDH13P55290 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH13P55290 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDH13P55290 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH13P55290 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH13P55290 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH13P55290 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH13P55290 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH13P55290 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH13P55290 AC133552.2-202ENST00000575694 574 ntBASIC19.21■□□□□ 0.67
CDH13P55290 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDH13P55290 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 AL050303.2-201ENST00000619798 666 ntBASIC19.21■□□□□ 0.67
CDH13P55290 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDH13P55290 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDH13P55290 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH13P55290 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH13P55290 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH13P55290 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH13P55290 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH13P55290 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH13P55290 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH13P55290 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH13P55290 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH13P55290 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH13P55290 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH13P55290 AC004408.2-201ENST00000623613 2777 ntBASIC19.2■□□□□ 0.66
CDH13P55290 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH13P55290 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH13P55290 GPX1P1-201ENST00000388829 606 ntBASIC19.2■□□□□ 0.66
CDH13P55290 CDCA4P2-201ENST00000441182 718 ntBASIC19.2■□□□□ 0.66
CDH13P55290 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.2■□□□□ 0.66
CDH13P55290 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH13P55290 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH13P55290 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDH13P55290 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH13P55290 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDH13P55290 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH13P55290 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDH13P55290 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CDH13P55290 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDH13P55290 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CDH13P55290 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH13P55290 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
CDH13P55290 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH13P55290 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH13P55290 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms