Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 AC117947.1-201ENST00000427448 529 ntBASIC20.35■□□□□ 0.85
PTPN5P54829 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.35■□□□□ 0.85
PTPN5P54829 ECEL1P2-202ENST00000465689 757 ntBASIC20.35■□□□□ 0.85
PTPN5P54829 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN5P54829 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.35■□□□□ 0.85
PTPN5P54829 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.35■□□□□ 0.85
PTPN5P54829 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.35■□□□□ 0.85
PTPN5P54829 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN5P54829 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN5P54829 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN5P54829 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN5P54829 IER3-202ENST00000376377 1350 ntBASIC20.34■□□□□ 0.85
PTPN5P54829 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN5P54829 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
PTPN5P54829 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN5P54829 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PTPN5P54829 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PTPN5P54829 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PTPN5P54829 AC128688.1-201ENST00000487626 519 ntBASIC20.34■□□□□ 0.85
PTPN5P54829 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.34■□□□□ 0.85
PTPN5P54829 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.34■□□□□ 0.85
PTPN5P54829 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN5P54829 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.34■□□□□ 0.85
PTPN5P54829 CR392000.1-201ENST00000624770 1228 ntBASIC20.34■□□□□ 0.85
PTPN5P54829 AL121956.5-201ENST00000625261 221 ntBASIC20.34■□□□□ 0.85
PTPN5P54829 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN5P54829 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 KRT8P36-201ENST00000489121 1440 ntBASIC20.34■□□□□ 0.85
PTPN5P54829 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
PTPN5P54829 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN5P54829 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PTPN5P54829 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN5P54829 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN5P54829 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.33■□□□□ 0.85
PTPN5P54829 AC092647.4-201ENST00000457211 535 ntBASIC20.33■□□□□ 0.85
PTPN5P54829 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN5P54829 AC091390.4-202ENST00000476426 537 ntBASIC20.33■□□□□ 0.85
PTPN5P54829 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.33■□□□□ 0.85
PTPN5P54829 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN5P54829 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN5P54829 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PTPN5P54829 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN5P54829 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN5P54829 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN5P54829 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN5P54829 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN5P54829 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN5P54829 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PTPN5P54829 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN5P54829 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PTPN5P54829 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN5P54829 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN5P54829 TSPY14P-201ENST00000303979 915 ntBASIC20.32■□□□□ 0.84
PTPN5P54829 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN5P54829 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.32■□□□□ 0.84
PTPN5P54829 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN5P54829 KSR1P1-201ENST00000446298 240 ntBASIC20.32■□□□□ 0.84
PTPN5P54829 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN5P54829 AL356652.1-201ENST00000615962 565 ntBASIC20.32■□□□□ 0.84
PTPN5P54829 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN5P54829 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN5P54829 FP700111.2-201ENST00000619190 1892 ntBASIC20.32■□□□□ 0.84
PTPN5P54829 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN5P54829 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN5P54829 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN5P54829 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN5P54829 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN5P54829 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN5P54829 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN5P54829 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN5P54829 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN5P54829 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN5P54829 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN5P54829 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PTPN5P54829 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
PTPN5P54829 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN5P54829 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN5P54829 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
PTPN5P54829 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN5P54829 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PTPN5P54829 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN5P54829 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPN5P54829 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPN5P54829 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPN5P54829 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPN5P54829 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN5P54829 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN5P54829 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN5P54829 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN5P54829 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms