Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT9P35527 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT9P35527 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT9P35527 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT9P35527 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT9P35527 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT9P35527 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT9P35527 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRT9P35527 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT9P35527 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT9P35527 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT9P35527 AF201337.1-201ENST00000520239 748 ntBASIC21.49■■□□□ 1.03
KRT9P35527 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.49■■□□□ 1.03
KRT9P35527 AC105036.2-201ENST00000569468 176 ntBASIC21.49■■□□□ 1.03
KRT9P35527 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
KRT9P35527 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRT9P35527 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT9P35527 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
KRT9P35527 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT9P35527 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT9P35527 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.49■■□□□ 1.03
KRT9P35527 AP001271.2-201ENST00000624018 1556 ntBASIC21.48■■□□□ 1.03
KRT9P35527 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
KRT9P35527 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT9P35527 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 KRT8P20-201ENST00000423953 1409 ntBASIC21.48■■□□□ 1.03
KRT9P35527 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT9P35527 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
KRT9P35527 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 CROCCP5-201ENST00000436658 830 ntBASIC21.48■■□□□ 1.03
KRT9P35527 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT9P35527 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.48■■□□□ 1.03
KRT9P35527 AL589743.5-201ENST00000616611 1050 ntBASIC21.48■■□□□ 1.03
KRT9P35527 AL050303.2-201ENST00000619798 666 ntBASIC21.48■■□□□ 1.03
KRT9P35527 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT9P35527 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT9P35527 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KRT9P35527 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.47■■□□□ 1.03
KRT9P35527 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT9P35527 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT9P35527 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT9P35527 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT9P35527 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.47■■□□□ 1.03
KRT9P35527 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.47■■□□□ 1.03
KRT9P35527 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.47■■□□□ 1.03
KRT9P35527 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT9P35527 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT9P35527 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.47■■□□□ 1.03
KRT9P35527 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT9P35527 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT9P35527 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT9P35527 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
KRT9P35527 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT9P35527 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.46■■□□□ 1.03
KRT9P35527 AC006970.2-201ENST00000450065 779 ntBASIC21.46■■□□□ 1.03
KRT9P35527 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT9P35527 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT9P35527 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT9P35527 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
KRT9P35527 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT9P35527 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
KRT9P35527 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.45■■□□□ 1.03
KRT9P35527 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.45■■□□□ 1.03
KRT9P35527 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT9P35527 MKRN4P-201ENST00000444706 1521 ntBASIC21.45■■□□□ 1.02
KRT9P35527 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.45■■□□□ 1.02
KRT9P35527 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT9P35527 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT9P35527 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
KRT9P35527 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT9P35527 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.45■■□□□ 1.02
KRT9P35527 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT9P35527 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT9P35527 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT9P35527 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.45■■□□□ 1.02
KRT9P35527 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.45■■□□□ 1.02
KRT9P35527 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.45■■□□□ 1.02
KRT9P35527 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.45■■□□□ 1.02
KRT9P35527 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms