Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD40P25942 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CD40P25942 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.99■□□□□ 0.31
CD40P25942 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
CD40P25942 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD40P25942 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD40P25942 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD40P25942 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.99■□□□□ 0.31
CD40P25942 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD40P25942 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD40P25942 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.98■□□□□ 0.31
CD40P25942 AP001271.2-201ENST00000624018 1556 ntBASIC16.98■□□□□ 0.31
CD40P25942 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CD40P25942 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.98■□□□□ 0.31
CD40P25942 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD40P25942 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.98■□□□□ 0.31
CD40P25942 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD40P25942 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.98■□□□□ 0.31
CD40P25942 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CD40P25942 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.98■□□□□ 0.31
CD40P25942 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD40P25942 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CD40P25942 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD40P25942 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.98■□□□□ 0.31
CD40P25942 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.98■□□□□ 0.31
CD40P25942 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD40P25942 BX088651.1-201ENST00000540551 451 ntBASIC16.98■□□□□ 0.31
CD40P25942 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.98■□□□□ 0.31
CD40P25942 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.98■□□□□ 0.31
CD40P25942 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.98■□□□□ 0.31
CD40P25942 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.98■□□□□ 0.31
CD40P25942 CR392000.1-201ENST00000624770 1228 ntBASIC16.98■□□□□ 0.31
CD40P25942 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD40P25942 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.98■□□□□ 0.31
CD40P25942 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD40P25942 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.98■□□□□ 0.31
CD40P25942 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD40P25942 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD40P25942 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD40P25942 AL162377.1-201ENST00000618844 1793 ntBASIC16.97■□□□□ 0.31
CD40P25942 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD40P25942 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.97■□□□□ 0.31
CD40P25942 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD40P25942 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD40P25942 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.97■□□□□ 0.31
CD40P25942 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.97■□□□□ 0.31
CD40P25942 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD40P25942 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.97■□□□□ 0.31
CD40P25942 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.97■□□□□ 0.31
CD40P25942 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CD40P25942 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CD40P25942 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD40P25942 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.97■□□□□ 0.31
CD40P25942 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.97■□□□□ 0.31
CD40P25942 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.97■□□□□ 0.31
CD40P25942 AL355075.4-201ENST00000554988 638 ntBASIC16.97■□□□□ 0.31
CD40P25942 REXO1L12P-201ENST00000622156 912 ntBASIC16.97■□□□□ 0.31
CD40P25942 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.97■□□□□ 0.31
CD40P25942 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CD40P25942 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD40P25942 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD40P25942 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
CD40P25942 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD40P25942 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD40P25942 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.96■□□□□ 0.31
CD40P25942 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD40P25942 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD40P25942 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD40P25942 KRT16P1-201ENST00000399124 1418 ntBASIC16.96■□□□□ 0.31
CD40P25942 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD40P25942 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.96■□□□□ 0.31
CD40P25942 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.96■□□□□ 0.31
CD40P25942 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD40P25942 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD40P25942 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.96■□□□□ 0.31
CD40P25942 NUDT16P1-203ENST00000513809 620 ntBASIC16.96■□□□□ 0.31
CD40P25942 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.96■□□□□ 0.31
CD40P25942 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.96■□□□□ 0.31
CD40P25942 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD40P25942 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CD40P25942 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD40P25942 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD40P25942 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD40P25942 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD40P25942 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CD40P25942 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.95■□□□□ 0.3
CD40P25942 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 TSPY15P-201ENST00000457163 923 ntBASIC16.95■□□□□ 0.3
CD40P25942 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CD40P25942 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.95■□□□□ 0.3
CD40P25942 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.95■□□□□ 0.3
CD40P25942 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.95■□□□□ 0.3
CD40P25942 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms