Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP11P24347 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.69■□□□□ 0.58
MMP11P24347 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP11P24347 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP11P24347 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.69■□□□□ 0.58
MMP11P24347 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP11P24347 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP11P24347 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP11P24347 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.69■□□□□ 0.58
MMP11P24347 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.69■□□□□ 0.58
MMP11P24347 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.69■□□□□ 0.58
MMP11P24347 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.69■□□□□ 0.58
MMP11P24347 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.69■□□□□ 0.58
MMP11P24347 AL031963.3-201ENST00000606441 850 ntBASIC18.69■□□□□ 0.58
MMP11P24347 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.69■□□□□ 0.58
MMP11P24347 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MMP11P24347 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MMP11P24347 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.69■□□□□ 0.58
MMP11P24347 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.68■□□□□ 0.58
MMP11P24347 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP11P24347 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.68■□□□□ 0.58
MMP11P24347 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MMP11P24347 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MMP11P24347 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.68■□□□□ 0.58
MMP11P24347 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP11P24347 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP11P24347 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.68■□□□□ 0.58
MMP11P24347 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MMP11P24347 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP11P24347 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
MMP11P24347 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP11P24347 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP11P24347 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
MMP11P24347 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
MMP11P24347 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP11P24347 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP11P24347 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.67■□□□□ 0.58
MMP11P24347 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MMP11P24347 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.67■□□□□ 0.58
MMP11P24347 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP11P24347 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP11P24347 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP11P24347 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP11P24347 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.67■□□□□ 0.58
MMP11P24347 AL049637.2-201ENST00000641778 930 ntBASIC18.67■□□□□ 0.58
MMP11P24347 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP11P24347 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP11P24347 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP11P24347 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP11P24347 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP11P24347 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP11P24347 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MMP11P24347 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MMP11P24347 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.66■□□□□ 0.58
MMP11P24347 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.66■□□□□ 0.58
MMP11P24347 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP11P24347 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.66■□□□□ 0.58
MMP11P24347 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MMP11P24347 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP11P24347 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MMP11P24347 TCF3P1-201ENST00000423021 1937 ntBASIC18.66■□□□□ 0.58
MMP11P24347 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP11P24347 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP11P24347 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MMP11P24347 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 KRT8P17-201ENST00000453110 1448 ntBASIC18.66■□□□□ 0.58
MMP11P24347 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP11P24347 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 NBPF21P-201ENST00000425093 1451 ntBASIC18.65■□□□□ 0.58
MMP11P24347 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms