Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC1P18887 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC1P18887 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC1P18887 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
XRCC1P18887 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRCC1P18887 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
XRCC1P18887 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.6■□□□□ 0.73
XRCC1P18887 AC125437.2-201ENST00000625180 2167 ntBASIC19.6■□□□□ 0.73
XRCC1P18887 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.6■□□□□ 0.73
XRCC1P18887 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
XRCC1P18887 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.6■□□□□ 0.73
XRCC1P18887 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.6■□□□□ 0.73
XRCC1P18887 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.6■□□□□ 0.73
XRCC1P18887 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.6■□□□□ 0.73
XRCC1P18887 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.6■□□□□ 0.73
XRCC1P18887 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRCC1P18887 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.6■□□□□ 0.73
XRCC1P18887 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XRCC1P18887 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.59■□□□□ 0.73
XRCC1P18887 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
XRCC1P18887 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.59■□□□□ 0.73
XRCC1P18887 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
XRCC1P18887 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.59■□□□□ 0.73
XRCC1P18887 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRCC1P18887 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.59■□□□□ 0.73
XRCC1P18887 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRCC1P18887 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
XRCC1P18887 RN7SL471P-201ENST00000580476 299 ntBASIC19.59■□□□□ 0.73
XRCC1P18887 AC069544.1-201ENST00000609399 999 ntBASIC19.59■□□□□ 0.73
XRCC1P18887 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRCC1P18887 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XRCC1P18887 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.59■□□□□ 0.73
XRCC1P18887 AL158211.5-201ENST00000623583 2518 ntBASIC19.59■□□□□ 0.73
XRCC1P18887 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.59■□□□□ 0.73
XRCC1P18887 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.59■□□□□ 0.73
XRCC1P18887 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.59■□□□□ 0.73
XRCC1P18887 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRCC1P18887 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.59■□□□□ 0.73
XRCC1P18887 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC1P18887 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.58■□□□□ 0.73
XRCC1P18887 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
XRCC1P18887 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.58■□□□□ 0.73
XRCC1P18887 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC1P18887 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.58■□□□□ 0.73
XRCC1P18887 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC1P18887 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC1P18887 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
XRCC1P18887 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC1P18887 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.58■□□□□ 0.73
XRCC1P18887 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.58■□□□□ 0.73
XRCC1P18887 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
XRCC1P18887 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC1P18887 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC1P18887 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC1P18887 RPS2P52-201ENST00000469610 820 ntBASIC19.58■□□□□ 0.72
XRCC1P18887 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC1P18887 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
XRCC1P18887 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.58■□□□□ 0.72
XRCC1P18887 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC1P18887 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
XRCC1P18887 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
XRCC1P18887 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC1P18887 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC1P18887 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
XRCC1P18887 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC1P18887 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
XRCC1P18887 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC1P18887 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
XRCC1P18887 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC1P18887 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
XRCC1P18887 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.57■□□□□ 0.72
XRCC1P18887 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC1P18887 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC1P18887 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
XRCC1P18887 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.57■□□□□ 0.72
XRCC1P18887 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.57■□□□□ 0.72
XRCC1P18887 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
XRCC1P18887 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.57■□□□□ 0.72
XRCC1P18887 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC1P18887 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC1P18887 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.57■□□□□ 0.72
XRCC1P18887 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC1P18887 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC1P18887 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
XRCC1P18887 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC1P18887 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.56■□□□□ 0.72
XRCC1P18887 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.56■□□□□ 0.72
XRCC1P18887 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
XRCC1P18887 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms