Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL11A1P12107 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
COL11A1P12107 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL11A1P12107 CRYGFP-201ENST00000418459 633 ntBASIC22.47■■□□□ 1.19
COL11A1P12107 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.47■■□□□ 1.19
COL11A1P12107 FAM207BP-201ENST00000447172 505 ntBASIC22.47■■□□□ 1.19
COL11A1P12107 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
COL11A1P12107 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.47■■□□□ 1.19
COL11A1P12107 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL11A1P12107 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
COL11A1P12107 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
COL11A1P12107 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A1P12107 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A1P12107 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A1P12107 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A1P12107 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A1P12107 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A1P12107 AC004951.3-201ENST00000418645 1148 ntBASIC22.46■■□□□ 1.19
COL11A1P12107 AC128688.1-201ENST00000487626 519 ntBASIC22.46■■□□□ 1.19
COL11A1P12107 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.46■■□□□ 1.19
COL11A1P12107 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.46■■□□□ 1.19
COL11A1P12107 AL691432.2-201ENST00000607222 2038 ntBASIC22.46■■□□□ 1.19
COL11A1P12107 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.46■■□□□ 1.19
COL11A1P12107 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A1P12107 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A1P12107 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A1P12107 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A1P12107 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
COL11A1P12107 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A1P12107 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
COL11A1P12107 MFAP1P1-201ENST00000442257 1255 ntBASIC22.45■■□□□ 1.19
COL11A1P12107 AC022616.7-201ENST00000525383 220 ntBASIC22.45■■□□□ 1.19
COL11A1P12107 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.45■■□□□ 1.19
COL11A1P12107 WWOX-216ENST00000569818 525 ntBASIC22.45■■□□□ 1.19
COL11A1P12107 AC011298.2-201ENST00000617989 482 ntBASIC22.45■■□□□ 1.19
COL11A1P12107 AC006011.2-201ENST00000621313 1158 ntBASIC22.45■■□□□ 1.19
COL11A1P12107 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
COL11A1P12107 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.45■■□□□ 1.19
COL11A1P12107 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.45■■□□□ 1.19
COL11A1P12107 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A1P12107 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.45■■□□□ 1.18
COL11A1P12107 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A1P12107 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
COL11A1P12107 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A1P12107 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A1P12107 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.45■■□□□ 1.18
COL11A1P12107 TSPY14P-201ENST00000303979 915 ntBASIC22.45■■□□□ 1.18
COL11A1P12107 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A1P12107 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC22.45■■□□□ 1.18
COL11A1P12107 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
COL11A1P12107 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.45■■□□□ 1.18
COL11A1P12107 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A1P12107 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.45■■□□□ 1.18
COL11A1P12107 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A1P12107 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A1P12107 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A1P12107 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A1P12107 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A1P12107 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.44■■□□□ 1.18
COL11A1P12107 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.44■■□□□ 1.18
COL11A1P12107 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A1P12107 NTF6B-201ENST00000591913 560 ntBASIC22.44■■□□□ 1.18
COL11A1P12107 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A1P12107 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A1P12107 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
COL11A1P12107 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A1P12107 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A1P12107 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A1P12107 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A1P12107 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
COL11A1P12107 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
COL11A1P12107 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A1P12107 AC091390.4-202ENST00000476426 537 ntBASIC22.43■■□□□ 1.18
COL11A1P12107 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.43■■□□□ 1.18
COL11A1P12107 SLC25A1P4-201ENST00000567977 778 ntBASIC22.43■■□□□ 1.18
COL11A1P12107 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.43■■□□□ 1.18
COL11A1P12107 AC005363.2-201ENST00000618631 242 ntBASIC22.43■■□□□ 1.18
COL11A1P12107 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A1P12107 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A1P12107 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A1P12107 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A1P12107 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A1P12107 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
COL11A1P12107 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.43■■□□□ 1.18
COL11A1P12107 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A1P12107 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A1P12107 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.43■■□□□ 1.18
COL11A1P12107 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.43■■□□□ 1.18
COL11A1P12107 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A1P12107 AC020907.5-201ENST00000624372 1936 ntBASIC22.42■■□□□ 1.18
COL11A1P12107 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL11A1P12107 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL11A1P12107 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
COL11A1P12107 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL11A1P12107 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.42■■□□□ 1.18
COL11A1P12107 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
COL11A1P12107 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.42■■□□□ 1.18
COL11A1P12107 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL11A1P12107 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.42■■□□□ 1.18
COL11A1P12107 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms