Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MYC-208ENST00000641036 567 ntBASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 CD70-202ENST00000423145 881 ntTSL 2 BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSB-PGBD3P0DP91 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 TSPY5P-201ENST00000426936 936 ntBASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 PTPA-216ENST00000432651 857 ntTSL 2 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 WDR88-203ENST00000592765 651 ntTSL 5 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 AC096733.2-201ENST00000609937 1394 ntBASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC26.14■■□□□ 1.78
CSB-PGBD3P0DP91 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CSB-PGBD3P0DP91 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CSB-PGBD3P0DP91 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
CSB-PGBD3P0DP91 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC26.14■■□□□ 1.77
CSB-PGBD3P0DP91 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 SLC25A1P2-201ENST00000430693 912 ntBASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 COX11P1-201ENST00000489116 835 ntBASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CSB-PGBD3P0DP91 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 AC007663.1-201ENST00000438948 1240 ntBASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSB-PGBD3P0DP91 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CSB-PGBD3P0DP91 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.11■■□□□ 1.77
CSB-PGBD3P0DP91 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC26.11■■□□□ 1.77
CSB-PGBD3P0DP91 KRT18P56-201ENST00000507275 550 ntBASIC26.11■■□□□ 1.77
CSB-PGBD3P0DP91 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC26.11■■□□□ 1.77
CSB-PGBD3P0DP91 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC26.11■■□□□ 1.77
CSB-PGBD3P0DP91 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC26.11■■□□□ 1.77
CSB-PGBD3P0DP91 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CSB-PGBD3P0DP91 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms