Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP2P08253 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
MMP2P08253 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
MMP2P08253 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.84■□□□□ 0.77
MMP2P08253 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP2P08253 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP2P08253 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 RN7SL471P-201ENST00000580476 299 ntBASIC19.84■□□□□ 0.77
MMP2P08253 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.84■□□□□ 0.77
MMP2P08253 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
MMP2P08253 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP2P08253 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
MMP2P08253 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP2P08253 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP2P08253 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP2P08253 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP2P08253 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP2P08253 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP2P08253 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP2P08253 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
MMP2P08253 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP2P08253 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP2P08253 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.83■□□□□ 0.77
MMP2P08253 YBX1P10-201ENST00000444752 975 ntBASIC19.83■□□□□ 0.77
MMP2P08253 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.83■□□□□ 0.77
MMP2P08253 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP2P08253 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.83■□□□□ 0.77
MMP2P08253 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.83■□□□□ 0.77
MMP2P08253 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP2P08253 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP2P08253 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP2P08253 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.83■□□□□ 0.76
MMP2P08253 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
MMP2P08253 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
MMP2P08253 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP2P08253 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP2P08253 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP2P08253 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP2P08253 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP2P08253 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
MMP2P08253 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP2P08253 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP2P08253 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP2P08253 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP2P08253 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.82■□□□□ 0.76
MMP2P08253 AL023875.1-201ENST00000640777 796 ntBASIC19.82■□□□□ 0.76
MMP2P08253 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP2P08253 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP2P08253 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP2P08253 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP2P08253 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MMP2P08253 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MMP2P08253 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP2P08253 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.82■□□□□ 0.76
MMP2P08253 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MMP2P08253 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP2P08253 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.81■□□□□ 0.76
MMP2P08253 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.81■□□□□ 0.76
MMP2P08253 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.81■□□□□ 0.76
MMP2P08253 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP2P08253 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MMP2P08253 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP2P08253 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP2P08253 FAM201B-201ENST00000458407 597 ntBASIC19.81■□□□□ 0.76
MMP2P08253 KRT18P16-201ENST00000510337 1294 ntBASIC19.81■□□□□ 0.76
MMP2P08253 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MMP2P08253 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.81■□□□□ 0.76
MMP2P08253 ITM2C-210ENST00000620962 501 ntBASIC19.81■□□□□ 0.76
MMP2P08253 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MMP2P08253 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP2P08253 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP2P08253 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP2P08253 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP2P08253 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms