Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRPRAP08240 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.9■□□□□ 0.78
SRPRAP08240 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SRPRAP08240 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
SRPRAP08240 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SRPRAP08240 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.89■□□□□ 0.77
SRPRAP08240 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.89■□□□□ 0.77
SRPRAP08240 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 AC211429.1-201ENST00000415277 523 ntBASIC19.89■□□□□ 0.77
SRPRAP08240 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.89■□□□□ 0.77
SRPRAP08240 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SRPRAP08240 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.89■□□□□ 0.77
SRPRAP08240 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.89■□□□□ 0.77
SRPRAP08240 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.89■□□□□ 0.77
SRPRAP08240 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.89■□□□□ 0.77
SRPRAP08240 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.89■□□□□ 0.77
SRPRAP08240 AC026271.3-201ENST00000571884 352 ntBASIC19.89■□□□□ 0.77
SRPRAP08240 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.89■□□□□ 0.77
SRPRAP08240 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.89■□□□□ 0.77
SRPRAP08240 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRPRAP08240 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.88■□□□□ 0.77
SRPRAP08240 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SRPRAP08240 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.88■□□□□ 0.77
SRPRAP08240 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SRPRAP08240 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.88■□□□□ 0.77
SRPRAP08240 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.88■□□□□ 0.77
SRPRAP08240 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.88■□□□□ 0.77
SRPRAP08240 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRPRAP08240 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.88■□□□□ 0.77
SRPRAP08240 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SRPRAP08240 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
SRPRAP08240 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 UNC93B2-201ENST00000285383 730 ntBASIC19.87■□□□□ 0.77
SRPRAP08240 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 AC087499.1-201ENST00000418141 1075 ntBASIC19.87■□□□□ 0.77
SRPRAP08240 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 RBM17P1-201ENST00000453646 1190 ntBASIC19.87■□□□□ 0.77
SRPRAP08240 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.87■□□□□ 0.77
SRPRAP08240 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.87■□□□□ 0.77
SRPRAP08240 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.87■□□□□ 0.77
SRPRAP08240 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.87■□□□□ 0.77
SRPRAP08240 LINC01023-201ENST00000606054 436 ntBASIC19.87■□□□□ 0.77
SRPRAP08240 AC131212.4-201ENST00000623606 975 ntBASIC19.87■□□□□ 0.77
SRPRAP08240 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.87■□□□□ 0.77
SRPRAP08240 AC009237.14-201ENST00000609975 1594 ntBASIC19.87■□□□□ 0.77
SRPRAP08240 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRPRAP08240 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 KRT8P8-201ENST00000434750 1448 ntBASIC19.86■□□□□ 0.77
SRPRAP08240 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.86■□□□□ 0.77
SRPRAP08240 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.86■□□□□ 0.77
SRPRAP08240 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 MMP23A-201ENST00000234610 1017 ntBASIC19.86■□□□□ 0.77
SRPRAP08240 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.86■□□□□ 0.77
SRPRAP08240 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SRPRAP08240 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.86■□□□□ 0.77
SRPRAP08240 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.86■□□□□ 0.77
SRPRAP08240 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SRPRAP08240 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SRPRAP08240 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRPRAP08240 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms